Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene17835 SustainPine v3.0 4568
• AutoFact: Small glutamine-rich tetratricopeptide repeat-containing protein A, putative n=1 Tax=Ricinus communis RepID=B9SE65_RICCO 0.0
• FL-Next: sp=TPR repeat-containing thioredoxin TTL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene17860 SustainPine v3.0 763
• AutoFact: Alpha-soluble NSF attachment protein n=2 Tax=Elaeis guineensis RepID=B3TM19_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-soluble NSF attachment protein 2.733e-23
C-terminus
sp_v3.0_unigene17895 SustainPine v3.0 1788
• AutoFact: pfam12854, PPR_1, PPR repeat 8.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene17912 SustainPine v3.0 1543
• AutoFact: pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 7.149e-18
Complete
sp_v3.0_unigene17940 SustainPine v3.0 2129
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 8.252e-10
C-terminus
sp_v3.0_unigene18062 SustainPine v3.0 670
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene18139 SustainPine v3.0 1572
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18158 SustainPine v3.0 1191
• AutoFact: PPR multi-domain protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 8.02e-14
Complete
sp_v3.0_unigene18213 SustainPine v3.0 1378
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD40 repeat protein, COMPASS complex protein 7.676e-12
Complete
sp_v3.0_unigene18254 SustainPine v3.0 1623
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SWE4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 1.243e-09
Complete
sp_v3.0_unigene18340 SustainPine v3.0 969
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.791e-37
Putative C-terminus
sp_v3.0_unigene18379 SustainPine v3.0 792
• AutoFact: PREDICTED: tetratricopeptide repeat protein 5-like [Apis mellifera] 5.0e-31
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene18397 SustainPine v3.0 949
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 9.02e-12
C-terminus
sp_v3.0_unigene18410 SustainPine v3.0 570
• AutoFact: RecName: Full=70 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Rotamase emb|CAA60505.1| peptidylprolyl isomerase [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidylprolyl isomerase, putative 2.724e-15
Internal
sp_v3.0_unigene18475 SustainPine v3.0 758
• AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=C0PPR8_PICSI 0.0
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein phosphatase 0.0
C-terminus
sp_v3.0_unigene18650 SustainPine v3.0 560
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 6.249e-08
Internal
sp_v3.0_unigene18741 SustainPine v3.0 624
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene18787 SustainPine v3.0 1002
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 5.667e-19
C-terminus
sp_v3.0_unigene18788 SustainPine v3.0 662
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 2.278e-09
C-terminus
sp_v3.0_unigene18810 SustainPine v3.0 616
• AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain