Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13631 SustainPine v3.0 798
• AutoFact: putative pentatricopeptide repeat protein [Gossypium hirsutum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.181e-17
Internal
sp_v3.0_unigene13648 SustainPine v3.0 573
• AutoFact: Fkbp-rapamycin associated protein, putative n=1 Tax=Ricinus communis RepID=B9RWX6_RICCO 0.0
• FL-Next: sp=Serine/threonine-protein kinase TOR; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Target of rapamycin kinase 7.448e-13
Internal
sp_v3.0_unigene13677 SustainPine v3.0 957
• AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T9S4_RICCO 0.0
• FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Kinase, putative 1.496e-06
Internal
sp_v3.0_unigene13737 SustainPine v3.0 3300
• AutoFact: Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] ref|NP_850718.1| Mitogen activated protein kinase kinase kinase-like protein [Arabidopsis thaliana] gb|AAK83572.1| AT3g58640/F14P22_230 [Arabidopsis thaliana] gb|AAM98106.1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Map3k delta-1 protein kinase, putative 4.114e-22
Complete
sp_v3.0_unigene13797 SustainPine v3.0 1155
• AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849687.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849688.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thalia 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13826 SustainPine v3.0 939
• AutoFact: LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] gb|AAU15177.1| At1g76060 [Arabidopsis thaliana] gb|AEE35791.1| LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14019 SustainPine v3.0 930
• AutoFact: gametophytic factor 2 [Arabidopsis thaliana] dbj|BAC43188.1| putative DnaJ protein [Arabidopsis thaliana] gb|AED95612.1| gametophytic factor 2 [Arabidopsis thaliana] 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DnaJ protein-like 6.122e-07
N-terminus
sp_v3.0_unigene14030 SustainPine v3.0 992
• AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
• FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene14065 SustainPine v3.0 888
• AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.694e-09
Putative C-terminus
sp_v3.0_unigene14069 SustainPine v3.0 615
• AutoFact: Calcium-binding tetratricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8S8L9.1|Y2245_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein At2g32450 gb|AAM15073.1| putative O-GlcNAc transferase [Arabidopsis thaliana] gb|AAO4224 9.99967e-42
• FL-Next: sp=Uncharacterized TPR repeat-containing protein At2g32450; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene14115 SustainPine v3.0 863
• AutoFact: Cryptochrome DASH, chloroplastic/mitochondrial n=4 Tax=Oryza sativa RepID=CRYD_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cryptochrome DASH, chloroplastic/mitochondrial 1.825e-16
Internal
sp_v3.0_unigene14139 SustainPine v3.0 519
• AutoFact: APO protein 3 [Arabidopsis thaliana] ref|NP_001119475.1| APO protein 3 [Arabidopsis thaliana] sp|Q9FH50.1|APO3_ARATH RecName: Full=APO protein 3, mitochondrial; Flags: Precursor dbj|BAB08879.1| unnamed protein product [Arabidopsis thaliana] gb|AED97538.1| 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: APO protein 3, mitochondrial, putative 3.983e-09
C-terminus
sp_v3.0_unigene14256 SustainPine v3.0 933
• AutoFact: polygalacturonase [Arabidopsis thaliana] gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Polygalacturonase 0.0
C-terminus
sp_v3.0_unigene14281 SustainPine v3.0 1011
• AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 3.55e-19
C-terminus
sp_v3.0_unigene14421 SustainPine v3.0 666
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T3S4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene14543 SustainPine v3.0 376
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14577 SustainPine v3.0 1283
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.517e-14
Putative Complete
sp_v3.0_unigene14593 SustainPine v3.0 839
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene14596 SustainPine v3.0 338
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710 emb|CAB66909.1| putative protein [Arabidopsis thaliana] gb|AEE78579.1| pentatricopeptide repeat- 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 3.652e-07
Internal
sp_v3.0_unigene14686 SustainPine v3.0 286
• AutoFact: pfam01535, PPR, PPR repeat 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.376e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain