Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene11135 SustainPine v3.0 2982
AutoFact: ARM-repeat/tetratricopeptide repeat-like protein [Arabidopsis thaliana] dbj|BAF01564.1| hypothetical protein [Arabidopsis thaliana] gb|AED91507.1| ARM-repeat/tetratricopeptide repeat-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Translocon at the outer membrane of chloroplasts 64; Pisum sativum (Garden pea). Plastid; Chloroplast. 0.0
Sma3: Chromosome chr7 scaffold_294, whole genome shotgun sequence 0.0
Putative Complete
sp_v3.0_unigene11269 SustainPine v3.0 463
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene11368 SustainPine v3.0 1388
AutoFact: pfam12854, PPR_1, PPR repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.5e-10
Internal
sp_v3.0_unigene11379 SustainPine v3.0 1820
AutoFact: Alpha-soluble NSF attachment protein n=2 Tax=Elaeis guineensis RepID=B3TM19_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11402 SustainPine v3.0 2296
AutoFact: Peptidylprolyl isomerase, putative n=2 Tax=Ricinus communis RepID=B9T7Z2_RICCO 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase FKBP62; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 8.926e-18
Complete
sp_v3.0_unigene11415 SustainPine v3.0 1447
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T3G5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene11437 SustainPine v3.0 444
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM34_MARPO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.582e-15
Internal
sp_v3.0_unigene11503 SustainPine v3.0 2018
AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.208e-16
Complete
sp_v3.0_unigene11532 SustainPine v3.0 1306
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.574e-37
Complete
sp_v3.0_unigene11533 SustainPine v3.0 533
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.449e-26
Internal
sp_v3.0_unigene11652 SustainPine v3.0 1786
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene11858 SustainPine v3.0 1491
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T9P1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Choline-phosphate cytidylyltransferase B 1.541e-12
Complete
sp_v3.0_unigene12005 SustainPine v3.0 1896
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene12011 SustainPine v3.0 1333
AutoFact: puative protein [Arabidopsis thaliana] emb|CAB79800.1| puative protein [Arabidopsis thaliana] 8.00001e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene12096 SustainPine v3.0 790
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RV98_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.325e-06
Putative N-terminus
sp_v3.0_unigene12100 SustainPine v3.0 636
AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 1.578e-33
C-terminus
sp_v3.0_unigene12104 SustainPine v3.0 470
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene12200 SustainPine v3.0 568
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 7.888e-11
Internal
sp_v3.0_unigene12236 SustainPine v3.0 1047
AutoFact: RecName: Full=Serine/threonine-protein kinase ATR dbj|BAD61693.1| putative AtRAD3 [Oryza sativa Japonica Group] dbj|BAD62537.1| putative AtRAD3 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Serine/threonine-protein kinase ATR; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Serine/threonine-protein kinase ATR 2.245e-08
C-terminus
sp_v3.0_unigene12303 SustainPine v3.0 1506
AutoFact: kinesin-like protein KIF18A [Danio rerio] gb|AAH47799.1| Zgc:55995 [Danio rerio] gb|AAI63966.1| Zgc:55995 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kif4, putative 1.915e-11
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain