Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene147630 SustainPine v3.0 457
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.073e-07
Putative Complete
sp_v3.0_unigene147631 SustainPine v3.0 266
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-38
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene147635 SustainPine v3.0 722
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 3.362e-10
Putative Complete
sp_v3.0_unigene147637 SustainPine v3.0 717
AutoFact: Ubiquitin (Ribosomal protein L40), putative n=1 Tax=Schistosoma mansoni RepID=C4Q9U2_SCHMA 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.637e-08
C-terminus
sp_v3.0_unigene147640 SustainPine v3.0 557
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.712e-08
Putative Complete
sp_v3.0_unigene147643 SustainPine v3.0 509
AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 2.0e-36
FL-Next: tr=Ubiquitin; Morus bombycis. 0.0
Complete
sp_v3.0_unigene147644 SustainPine v3.0 383
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene147690 SustainPine v3.0 768
AutoFact: Ubiquitin [Medicago truncatula] 1.0e-36
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative N-terminus
sp_v3.0_unigene148150 SustainPine v3.0 266
AutoFact: Small ubiquitin-related modifier 1 n=2 Tax=Arabidopsis RepID=SUMO1_ARATH 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-like protein SMT3 2.995e-08
N-terminus
sp_v3.0_unigene148283 SustainPine v3.0 311
AutoFact: phosphatidylinositol 3- and 4-kinase-like protein [Arabidopsis thaliana] gb|AAL31202.1| At1g13640/F21F23_7 [Arabidopsis thaliana] gb|AAN31098.1| At1g13640/F21F23_7 [Arabidopsis thaliana] gb|AEE29053.1| phosphatidylinositol 3- and 4-kinase-like protein [Ar 6.0e-35
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148448 SustainPine v3.0 288
AutoFact: ubiquitin extension protein [Capsicum annuum] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene148683 SustainPine v3.0 118
AutoFact: [O] COG5272 Ubiquitin 4.0e-15
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene149288 SustainPine v3.0 134
AutoFact: ubiquitin C variant [Homo sapiens] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene149766 SustainPine v3.0 409
AutoFact: Membrane-anchored ubiquitin-fold protein 1 n=4 Tax=Oryza sativa RepID=MUB1_ORYSJ 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene150016 SustainPine v3.0 273
AutoFact: Inositol or phosphatidylinositol kinase, putative n=1 Tax=Ricinus communis RepID=B9RLG3_RICCO 1.0e-36
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Phosphatidylinositol 3-and 4-kinase family protein 3.314e-08
Internal
sp_v3.0_unigene150365 SustainPine v3.0 354
AutoFact: Actin (Fragment) n=1 Tax=Enchytraeus japonensis RepID=B6RNM7_9ANNE 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.084e-23
C-terminus
sp_v3.0_unigene150372 SustainPine v3.0 210
AutoFact: Ubiquitin n=2 Tax=Ciona RepID=Q8MY15_CIOSA 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150493 SustainPine v3.0 203
AutoFact: Polyubiquitin 5 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BYC3_9EUKA 9.0e-24
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin 1.963e-07
Putative C-terminus
sp_v3.0_unigene150557 SustainPine v3.0 279
AutoFact: Small ubiquitin-like modifier (SUMO), putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NCE4_PHYIT 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene150597 SustainPine v3.0 144
AutoFact: Ubiquitin family n=1 Tax=Ruminococcus albus 8 RepID=E9S7A1_RUMAL 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative polyubiquitin 5.096e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain