Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene131623 SustainPine v3.0 401
AutoFact: ubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene131965 SustainPine v3.0 373
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 1.0e-30
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene132563 SustainPine v3.0 236
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.0e-27
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene132596 SustainPine v3.0 1008
AutoFact: polyubiquitin [Triticum aestivum] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.803e-08
Complete
sp_v3.0_unigene132677 SustainPine v3.0 198
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 1.0e-15
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative N-terminus
sp_v3.0_unigene132695 SustainPine v3.0 275
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-30
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene132889 SustainPine v3.0 228
AutoFact: Ubiquitin [Medicago truncatula] 9.0e-20
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative N-terminus
sp_v3.0_unigene133089 SustainPine v3.0 456
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 9.80909e-45
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete
sp_v3.0_unigene135634 SustainPine v3.0 256
AutoFact: PREDICTED: ubiquitin A-52 residue ribosomal protein fusion product 1 n=1 Tax=Rattus norvegicus RepID=UPI0001CF4A0F 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene135668 SustainPine v3.0 139
AutoFact: Ubiquitin n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CCU3_9EUKA 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene135976 SustainPine v3.0 461
AutoFact: Actin-2 (Fragment) n=1 Tax=Ascaris suum RepID=F1LCH5_ASCSU 0.0
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 1.671e-11
Internal
sp_v3.0_unigene136001 SustainPine v3.0 390
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 4.0e-38
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene137491 SustainPine v3.0 287
AutoFact: polyubiquitin [Triticum aestivum] 1.0e-37
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene137955 SustainPine v3.0 343
AutoFact: actin 6.0e-26
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.469e-31
C-terminus
sp_v3.0_unigene138484 SustainPine v3.0 290
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-33
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.465e-08
N-terminus
sp_v3.0_unigene140957 SustainPine v3.0 580
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.699e-08
Putative Complete
sp_v3.0_unigene141332 SustainPine v3.0 400
AutoFact: ubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.912e-08
Internal
sp_v3.0_unigene141346 SustainPine v3.0 450
AutoFact: Protein argonaute 1A n=3 Tax=Oryza sativa RepID=AGO1A_ORYSJ 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Eukaryotic translation initiation factor 2c, putative 2.603e-19
Internal
sp_v3.0_unigene141777 SustainPine v3.0 340
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Phosphatidylinositol 3-and 4-kinase family 4.386e-06
C-terminus
sp_v3.0_unigene141861 SustainPine v3.0 361
AutoFact: Polyubiquitin (Fragment) n=1 Tax=Lemna minor RepID=Q6B444_LEMMI 2.0e-17
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain