Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene54932 SustainPine v3.0 205
AutoFact: Ubiquitin, putative n=5 Tax=Chromadorea RepID=A8NSV0_BRUMA 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene55277 SustainPine v3.0 390
AutoFact: polyubiquitin [Sclerotinia sclerotiorum 1980] gb|EDN90771.1| polyubiquitin [Sclerotinia sclerotiorum 1980 UF-70] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin 1.264e-09
Putative Complete
sp_v3.0_unigene55337 SustainPine v3.0 379
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Picea sitchensis RepID=A9NUT3_PICSI 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 6.899e-19
C-terminus
sp_v3.0_unigene55385 SustainPine v3.0 463
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.626e-24
C-terminus
sp_v3.0_unigene55492 SustainPine v3.0 290
AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene55652 SustainPine v3.0 466
AutoFact: F12F1.29 protein n=1 Tax=Arabidopsis thaliana RepID=O65395_ARATH 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seryl-tRNA synthetase, putative 4.745e-08
N-terminus
sp_v3.0_unigene55727 SustainPine v3.0 382
AutoFact: PREDICTED: polyubiquitin-like n=1 Tax=Pan troglodytes RepID=UPI00020E4C70 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.465e-08
Putative Complete
sp_v3.0_unigene55778 SustainPine v3.0 295
AutoFact: Ubiquitin/ribosomal protein L40 fusion n=1 Tax=Bigelowiella natans RepID=Q7X739_BIGNA 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene55851 SustainPine v3.0 295
AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene56097 SustainPine v3.0 217
AutoFact: [O] COG5272 Ubiquitin 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene56114 SustainPine v3.0 124
AutoFact: [O] COG5272 Ubiquitin 2.0e-13
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene56178 SustainPine v3.0 121
AutoFact: Ubiquitin n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SSZ7_VERA1 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56196 SustainPine v3.0 342
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative Complete
sp_v3.0_unigene56224 SustainPine v3.0 197
AutoFact: polyubiquitin [Pinus sylvestris] 1.0e-25
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin 4.94e-07
Putative N-terminus
sp_v3.0_unigene56293 SustainPine v3.0 341
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Picea sitchensis RepID=A9NUT3_PICSI 5.0e-38
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 1.516e-18
N-terminus
sp_v3.0_unigene56325 SustainPine v3.0 159
AutoFact: Argonaute family member n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTW5_PHYPA 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Argonaute protein group 4.841e-16
Internal
sp_v3.0_unigene56372 SustainPine v3.0 460
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 2.097e-11
N-terminus
sp_v3.0_unigene56605 SustainPine v3.0 353
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.192e-30
Putative C-terminus
sp_v3.0_unigene56648 SustainPine v3.0 279
AutoFact: [O] COG5272 Ubiquitin 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene57163 SustainPine v3.0 255
AutoFact: Putative ubiquitin extension protein (Fragment) n=1 Tax=Brassica rapa RepID=Q39408_BRACM 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain