Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin

Term: IPR000626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene41892 SustainPine v3.0 198
AutoFact: polyubiquitin [Pinus sylvestris] 8.0e-14
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 1.443e-07
Internal
sp_v3.0_unigene43289 SustainPine v3.0 140
AutoFact: Argonaute protein group n=1 Tax=Populus trichocarpa RepID=B9I4Y6_POPTR 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 2c, putative 1.631e-13
C-terminus
sp_v3.0_unigene44242 SustainPine v3.0 540
AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene45360 SustainPine v3.0 719
AutoFact: Seryl-tRNA synthetase [Arabidopsis thaliana] gb|AAM14065.1| putative seryl-tRNA synthetase [Arabidopsis thaliana] gb|AAM67511.1| putative seryl-tRNA synthetase [Arabidopsis thaliana] gb|AEE28805.1| Seryl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seryl-tRNA synthetase, putative 1.971e-14
C-terminus
sp_v3.0_unigene45631 SustainPine v3.0 1244
AutoFact: putative polyubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Putative polyubiquitin 0.0
Complete
sp_v3.0_unigene46431 SustainPine v3.0 137
AutoFact: [O] COG5272 Ubiquitin 3.0e-17
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 9.296e-11
Putative C-terminus
sp_v3.0_unigene47993 SustainPine v3.0 976
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene48498 SustainPine v3.0 393
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 1.802e-10
Putative N-terminus
sp_v3.0_unigene49487 SustainPine v3.0 472
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.21e-25
C-terminus
sp_v3.0_unigene49602 SustainPine v3.0 1158
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bi-ubiquitin 1.816e-08
Putative Complete
sp_v3.0_unigene49923 SustainPine v3.0 1723
AutoFact: membrane-anchored ubiquitin-fold protein 6 [Arabidopsis thaliana] sp|Q8GWJ6.1|MUB6_ARATH RecName: Full=Membrane-anchored ubiquitin-fold protein 6; Short=AtMUB6; Short=Membrane-anchored ub-fold protein 6; Flags: Precursor dbj|BAC43392.1| unknown protein [A 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene50396 SustainPine v3.0 245
AutoFact: Seryl-tRNA synthetase n=4 Tax=Andropogoneae RepID=B6TBG7_MAIZE 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seryl-tRNA synthetase, putative 1.765e-11
Internal
sp_v3.0_unigene51091 SustainPine v3.0 131
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 3.0e-07
FL-Next: sp=Transcription factor bHLH66; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BHLH transcription factor 1.78e-20
Internal
sp_v3.0_unigene51254 SustainPine v3.0 538
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Putative Complete
sp_v3.0_unigene51533 SustainPine v3.0 473
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene51642 SustainPine v3.0 644
AutoFact: actin [Phalaenopsis hybrid cultivar] 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 1.525e-16
N-terminus
sp_v3.0_unigene51676 SustainPine v3.0 152
AutoFact: Ubiquitin-60S ribosomal protein L40 n=1 Tax=Trypanosoma cruzi RepID=RL402_TRYCR 3.0e-10
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene51745 SustainPine v3.0 327
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene51854 SustainPine v3.0 452
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.51e-07
Putative N-terminus
sp_v3.0_unigene51900 SustainPine v3.0 190
AutoFact: Putative ubiquitin C variant 1 n=1 Tax=Taeniopygia guttata RepID=B5G2N9_TAEGU 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain