Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: K Homology domain

Term: IPR004087  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7837 SustainPine v3.0 810
• AutoFact: KH domain containing protein, putative [Solanum demissum] 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene7858 SustainPine v3.0 1470
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana] gb|AAP37761.1| At5g53060 [Arabidopsis thaliana] gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene7934 SustainPine v3.0 1511
• AutoFact: Polyketide_cyc2 multi-domain protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 4.599e-16
Complete
sp_v3.0_unigene8176 SustainPine v3.0 3138
• AutoFact: Glutenin_hmw multi-domain protein 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8453 SustainPine v3.0 2918
• AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8505 SustainPine v3.0 3027
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01176.1| hypothetical protein [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Poly(RC)-binding protein, putative 2.287e-07
Complete
sp_v3.0_unigene8659 SustainPine v3.0 2572
• AutoFact: pfam00013, KH_1, KH domain 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene8692 SustainPine v3.0 1378
• AutoFact: Polyketide_cyc2 domain containing protein 3.0e-09
• FL-Next: sp=Abscisic acid receptor PYL8; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Bet v I allergen-like 1.028e-21
Complete
sp_v3.0_unigene8915 SustainPine v3.0 1499
• AutoFact: AKAP7_NLS domain containing protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYA6 9.234e-09
C-terminus
sp_v3.0_unigene9321 SustainPine v3.0 957
• AutoFact: DUF3411 multi-domain protein 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene9515 SustainPine v3.0 1945
• AutoFact: KH_1 domain containing protein 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Poly(RC)-binding protein, putative 7.986e-11
Putative Complete
sp_v3.0_unigene9795 SustainPine v3.0 373
• AutoFact: fragile X mental retardation syndrome-related protein 1 homolog B [Xenopus laevis] sp|Q7ZTQ5.1|FXR1B_XENLA RecName: Full=Fragile X mental retardation syndrome-related protein 1 homolog B; Short=xFxr1p-B gb|AAH43638.1| Fxr1h protein [Xenopus laevis] 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene10374 SustainPine v3.0 924
• AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 4.978e-16
Complete
sp_v3.0_unigene10520 SustainPine v3.0 563
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene11490 SustainPine v3.0 1745
• AutoFact: putative partner of Nob1 [Oryza sativa Japonica Group] dbj|BAB90119.1| putative partner of Nob1 [Oryza sativa Japonica Group] gb|EEE55513.1| hypothetical protein OsJ_03725 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11568 SustainPine v3.0 730
• AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bet v I allergen-like 3.221e-14
N-terminus
sp_v3.0_unigene11797 SustainPine v3.0 1534
• AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 4.478e-16
Complete
sp_v3.0_unigene12129 SustainPine v3.0 399
• AutoFact: DnaJ homolog subfamily B member 12 n=23 Tax=Eutheria RepID=DJB12_HUMAN 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene12474 SustainPine v3.0 1175
• AutoFact: protein RIK [Zea mays] sp|Q32SG5.1|RIK_MAIZE RecName: Full=Protein RIK; AltName: Full=Rough sheath 2-interacting KH domain protein; Short=RS2-interacting KH domain protein gb|AAY24682.1| ROUGH SHEATH2-interacting KH-domain protein [Zea mays] 0.0
• FL-Next: sp=Protein RIK; Zea mays (Maize). 0.0
• Sma3: Rough sheath 2-interacting KH domain protein 4.09e-10
N-terminus
sp_v3.0_unigene12701 SustainPine v3.0 2586
• AutoFact: pfam02364, Glucan_synthase, 1,3-beta-glucan synthase component 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 1,3-beta-glucan synthase 2.387e-37
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain