Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: K Homology domain

Term: IPR004087  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene84385 SustainPine v3.0 441
• AutoFact: KH_1 domain containing protein 9.0e-06
coding
sp_v3.0_unigene93802 SustainPine v3.0 1001
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 3.979e-10
C-terminus
sp_v3.0_unigene93872 SustainPine v3.0 1853
• AutoFact: [A] COG5176 Splicing factor (branch point binding protein) 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleic acid binding protein 4.853e-11
Complete
sp_v3.0_unigene94157 SustainPine v3.0 2141
• AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 1,3-beta-glucan synthase 1.539e-37
Complete
sp_v3.0_unigene94444 SustainPine v3.0 378
• AutoFact: protein RIK [Arabidopsis thaliana] sp|Q9LIA4.2|RIK_ARATH RecName: Full=Protein RIK; AltName: Full=Rough sheath 2-interacting KH domain protein; Short=RS2-interacting KH domain protein gb|AAY24687.1| KH-domain protein [Arabidopsis thaliana] gb|AEE77580.1| 9.0e-19
• FL-Next: sp=Protein RIK; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Rough sheath 2-interacting KH domain protein 2.356e-10
Internal
sp_v3.0_unigene94659 SustainPine v3.0 610
• AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Polyribonucleotide nucleotidyltransferase, putative 2.802e-08
Internal
sp_v3.0_unigene95513 SustainPine v3.0 338
• AutoFact: DUF3411 domain containing protein 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene96205 SustainPine v3.0 465
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene97269 SustainPine v3.0 1305
• AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 1.094e-34
Internal
sp_v3.0_unigene98098 SustainPine v3.0 410
• AutoFact: Glycosyl transferase, family 48 [Medicago truncatula] 0.0
• FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 1,3-beta-glucan synthase 5.351e-28
Internal
sp_v3.0_unigene98693 SustainPine v3.0 234
• AutoFact: Unassigned protein 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene100264 SustainPine v3.0 1171
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Os04g0385700 protein 9.26e-06
C-terminus
sp_v3.0_unigene100629 SustainPine v3.0 276
• AutoFact: Unassigned protein 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene100634 SustainPine v3.0 211
• AutoFact: callose synthase 5 [Arabidopsis thaliana] sp|Q3B724.1|CALS5_ARATH RecName: Full=Callose synthase 5; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 2; AltName: Full=Protein LESS ADHERENT POLLEN 1 gb|AAR00322.1| LAP1 [Ara 2.0e-25
• FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 1,3-beta-glucan synthase 1.5078e-42
Internal
sp_v3.0_unigene100924 SustainPine v3.0 755
• AutoFact: T-complex protein 11 [Arabidopsis thaliana] gb|AAB72161.1| unknown [Arabidopsis thaliana] gb|AAN41345.1| unknown protein [Arabidopsis thaliana] gb|AEE30311.1| T-complex protein 11 [Arabidopsis thaliana] 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene101449 SustainPine v3.0 951
• AutoFact: Unassigned protein 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene102072 SustainPine v3.0 794
• AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102516 SustainPine v3.0 706
• AutoFact: Unassigned protein 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene103266 SustainPine v3.0 622
• AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Callose synthase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 1,3-beta-glucan synthase 2.492e-37
Internal
sp_v3.0_unigene103277 SustainPine v3.0 633
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U200_9MARC 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain