Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8999 SustainPine v3.0 694
AutoFact: COP1 homolog [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP1 9.329e-11
Putative C-terminus
sp_v3.0_unigene9062 SustainPine v3.0 1843
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 4.547e-11
Complete
sp_v3.0_unigene9079 SustainPine v3.0 2477
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING finger protein 5 7.406e-15
Complete
sp_v3.0_unigene9399 SustainPine v3.0 1290
AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 9.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-H2 finger protein ATL2A 4.95e-07
Putative Complete
sp_v3.0_unigene9778 SustainPine v3.0 1197
AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9876 SustainPine v3.0 3404
AutoFact: putative serine/threonine-specific protein kinase [Oryza sativa Japonica Group] gb|EAZ41462.1| hypothetical protein OsJ_25984 [Oryza sativa Japonica Group] dbj|BAH00920.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Serine/threonine-specific protein kinase-like protein 3.733e-09
Complete
sp_v3.0_unigene10258 SustainPine v3.0 1372
AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 1.066e-20
C-terminus
sp_v3.0_unigene10265 SustainPine v3.0 355
AutoFact: contains similarity to C3HC4-type zinc fingers (Pfam:zf-C3HC4.hmm, score: 34.87) [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=F8M12.8 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene10317 SustainPine v3.0 1538
AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Somatic embryogenesis receptor kinase, putative 1.303e-09
Putative N-terminus
sp_v3.0_unigene10374 SustainPine v3.0 924
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 4.978e-16
Complete
sp_v3.0_unigene10578 SustainPine v3.0 3522
AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene10613 SustainPine v3.0 1512
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene10825 SustainPine v3.0 1537
AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding protein, putative, expressed 3.563e-10
Complete
sp_v3.0_unigene10938 SustainPine v3.0 607
AutoFact: E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana] sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName: Full=RING-H2 finger protein ATL42; Flags: Precursor emb|CAB43903.1| putative protein [Arabidopsis thaliana] emb|CAB8 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative RING finger 1 1.29e-10
Internal
sp_v3.0_unigene11114 SustainPine v3.0 1119
AutoFact: DUF716 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Plant viral-response family protein-like 2.353e-08
Putative Complete
sp_v3.0_unigene11281 SustainPine v3.0 1952
AutoFact: e-cadherin binding protein-like protein [Arabidopsis thaliana] emb|CAB69844.1| putative protein [Arabidopsis thaliana] gb|ABD59082.1| At5g01160 [Arabidopsis thaliana] dbj|BAE99278.1| hypothetical protein [Arabidopsis thaliana] gb|AED90305.1| e-cadherin bi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative Complete
sp_v3.0_unigene11437 SustainPine v3.0 444
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM34_MARPO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.582e-15
Internal
sp_v3.0_unigene11488 SustainPine v3.0 1473
AutoFact: nitric oxide synthase-interacting protein [Arabidopsis thaliana] gb|AAD25548.1|AC005850_5 Unknown protein [Arabidopsis thaliana] gb|AAM62779.1| unknown [Arabidopsis thaliana] gb|AAY57588.1| RING finger family protein [Arabidopsis thaliana] gb|ABG48469.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11532 SustainPine v3.0 1306
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.574e-37
Complete
sp_v3.0_unigene11568 SustainPine v3.0 730
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Bet v I allergen-like 3.221e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain