Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene149043 SustainPine v3.0 128
• AutoFact: Pex2_Pex12 domain containing protein 5.0e-08
• FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149427 SustainPine v3.0 178
• AutoFact: Copine n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UFI4_9EUKA 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149471 SustainPine v3.0 250
• AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 2.0e-08
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 9.004e-40
Internal
sp_v3.0_unigene149486 SustainPine v3.0 143
• AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYS0_PHYPA 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene149511 SustainPine v3.0 215
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 7.0e-23
• FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149518 SustainPine v3.0 208
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 1.0e-13
• FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149576 SustainPine v3.0 185
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SZ64_RICCO 8.0e-22
• FL-Next: sp=E3 ubiquitin protein ligase DRIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ring finger protein, putative 2.319e-08
Internal
sp_v3.0_unigene149619 SustainPine v3.0 153
• AutoFact: Unassigned protein 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene149651 SustainPine v3.0 105
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL5A 4.278e-07
Internal
sp_v3.0_unigene150080 SustainPine v3.0 159
• AutoFact: Unassigned protein 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158464 SustainPine v3.0 409
• AutoFact: WD repeat domain phosphoinositide-interacting protein 3 [Dictyostelium discoideum AX4] gb|EAL66150.1| WD repeat domain phosphoinositide-interacting protein 3 [Dictyostelium discoideum AX4] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat domain phosphoinositide-interacting protein 3 7.997e-09
Internal
sp_v3.0_unigene159082 SustainPine v3.0 314
• AutoFact: pfam07002, Copine, Copine 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 6.874e-21
Internal
sp_v3.0_unigene159571 SustainPine v3.0 238
• AutoFact: receptor protein kinase-like [Arabidopsis thaliana] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 1.902e-12
Internal
sp_v3.0_unigene159747 SustainPine v3.0 362
• AutoFact: Similarity to RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9LS98_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.886e-12
C-terminus
sp_v3.0_unigene160894 SustainPine v3.0 436
• AutoFact: Abscisic acid receptor PYL7 n=3 Tax=Brassicaceae RepID=PYL7_ARATH 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bet v I allergen-like 8.988e-18
Internal
sp_v3.0_unigene161074 SustainPine v3.0 464
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKE6_VITVI 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene161276 SustainPine v3.0 452
• AutoFact: Cellulose synthase-like protein D1 n=2 Tax=Oryza sativa RepID=CSLD1_ORYSJ 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene161285 SustainPine v3.0 357
• AutoFact: receptor-like protein kinase THESEUS 1 [Arabidopsis thaliana] sp|Q9LK35.1|THE1_ARATH RecName: Full=Receptor-like protein kinase THESEUS 1; Flags: Precursor dbj|BAA98098.1| receptor-protein kinase-like protein [Arabidopsis thaliana] gb|AED96490.1| receptor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: FERONIA receptor-like kinase 5.431e-18
Internal
sp_v3.0_unigene161386 SustainPine v3.0 334
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene162037 SustainPine v3.0 344
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 5.487e-10
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain