Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene126110 SustainPine v3.0 217
• AutoFact: rgd1, SGS3, lbl1; ragged seedling1 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.258e-09
Internal
sp_v3.0_unigene126253 SustainPine v3.0 915
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 1.704e-28
Putative N-terminus
sp_v3.0_unigene126573 SustainPine v3.0 994
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AAL15394.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gb|AEE80389.1| transducin/WD40 domain-containing protein [Arabidopsis thal 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat domain phosphoinositide-interacting protein 3 7.399e-09
Internal
sp_v3.0_unigene126753 SustainPine v3.0 1030
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.756e-06
Putative Complete
sp_v3.0_unigene126783 SustainPine v3.0 493
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.817e-10
Internal
sp_v3.0_unigene127061 SustainPine v3.0 672
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 8.605e-11
Internal
sp_v3.0_unigene127964 SustainPine v3.0 882
• AutoFact: Copine I-like protein n=4 Tax=Oryza RepID=Q6YYC5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 9.041e-21
N-terminus
sp_v3.0_unigene128396 SustainPine v3.0 450
• AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 2.944e-38
Internal
sp_v3.0_unigene128483 SustainPine v3.0 441
• AutoFact: T7A14.1 protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9ZVP6_ARATH 4.0e-08
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene129028 SustainPine v3.0 396
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 9.078e-11
Internal
sp_v3.0_unigene129734 SustainPine v3.0 521
• AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-binding protein 3.568e-08
C-terminus
sp_v3.0_unigene129846 SustainPine v3.0 602
• AutoFact: Cellulose synthase 6 n=5 Tax=rosids RepID=Q2IB38_EUCGR 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene130321 SustainPine v3.0 425
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130593 SustainPine v3.0 455
• AutoFact: Unassigned protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative NEP1-interacting protein 4.629e-13
C-terminus
sp_v3.0_unigene130746 SustainPine v3.0 507
• AutoFact: cellulose synthase-like protein CslE [Nicotiana tabacum] 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cellulose synthase 1.4013e-45
Internal
sp_v3.0_unigene130752 SustainPine v3.0 249
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 3.0e-19
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: E3 ubiquitin-protein ligase BRE1-like 2 2.613e-08
C-terminus
sp_v3.0_unigene130885 SustainPine v3.0 430
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.125e-12
Internal
sp_v3.0_unigene130968 SustainPine v3.0 243
• AutoFact: cellulose synthase 4 [Eucalyptus grandis] 3.0e-37
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene131021 SustainPine v3.0 284
• AutoFact: E3 ubiquitin-protein ligase BAH1 [Arabidopsis thaliana] sp|Q9SRX9.1|BAH1_ARATH RecName: Full=E3 ubiquitin-protein ligase BAH1; AltName: Full=Protein BENZOIC ACID HYPERSENSITIVE 1; AltName: Full=Protein NITROGEN LIMITATION ADAPTATION gb|AAF02879.1|AC009525 7.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene131024 SustainPine v3.0 479
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 2.0e-39
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.035e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain