Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene106862 SustainPine v3.0 112
AutoFact: Receptor protein kinase-like protein n=1 Tax=Capsicum annuum RepID=Q8VZH5_CAPAN 3.0e-11
FL-Next: sp=Receptor-like protein kinase FERONIA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: FERONIA receptor-like kinase 1.009e-19
Internal
sp_v3.0_unigene107041 SustainPine v3.0 597
AutoFact: abscisic acid receptor PYL7 [Arabidopsis thaliana] sp|Q1ECF1.1|PYL7_ARATH RecName: Full=Abscisic acid receptor PYL7; AltName: Full=ABI1-binding protein 7; AltName: Full=PYR1-like protein 7; AltName: Full=Regulatory components of ABA receptor 2 gb|ABF83673 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 3.277e-12
N-terminus
sp_v3.0_unigene107563 SustainPine v3.0 346
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 4.0e-20
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene107757 SustainPine v3.0 375
AutoFact: E3 ubiquitin-protein ligase HOS1 [Arabidopsis thaliana] sp|Q84JU6.1|HOS1_ARATH RecName: Full=E3 ubiquitin-protein ligase HOS1; AltName: Full=Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1; AltName: Full=RING finger protein HOS1 gb|AAO42259.1| un 5.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene107816 SustainPine v3.0 268
AutoFact: SNF2-related; Zinc finger, RING-type; ATP-requiring DNA helicase RecQ [Medicago truncatula] 5.0e-25
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.462e-08
Internal
sp_v3.0_unigene108514 SustainPine v3.0 427
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.923e-18
Internal
sp_v3.0_unigene108998 SustainPine v3.0 472
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 7.204e-24
Internal
sp_v3.0_unigene109509 SustainPine v3.0 168
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 3.0e-11
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.265e-07
Internal
sp_v3.0_unigene110041 SustainPine v3.0 473
AutoFact: helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] gb|AED91533.1| helicase , IBR and zinc finger protein domain-containing protein [Arabidopsis thaliana] 7.0e-38
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.852e-21
Internal
sp_v3.0_unigene110184 SustainPine v3.0 353
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene110946 SustainPine v3.0 213
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 2.0e-08
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.265e-07
Internal
sp_v3.0_unigene110958 SustainPine v3.0 224
AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB09338.1| serine/threonine-specific protein kinase-like protein [Arabidopsis thaliana] gb|AED96515.1| protein kinase family protein [Arabidopsis thaliana] 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine-specific protein kinase-like protein 1.339e-07
Internal
sp_v3.0_unigene111919 SustainPine v3.0 331
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 6.0e-27
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene112186 SustainPine v3.0 295
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKY8_PHYPA 6.0e-35
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene112274 SustainPine v3.0 479
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene112282 SustainPine v3.0 317
AutoFact: ATP-dependent RNA helicase, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C7G2_ARATH 8.99998e-41
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.012e-24
Internal
sp_v3.0_unigene113748 SustainPine v3.0 323
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-protein ligase, putative 8.949e-06
C-terminus
sp_v3.0_unigene114311 SustainPine v3.0 464
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene116215 SustainPine v3.0 493
AutoFact: Cellulose synthase n=1 Tax=Medicago truncatula RepID=Q2HT12_MEDTR 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene116218 SustainPine v3.0 131
AutoFact: Unassigned protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain