Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene76453 SustainPine v3.0 340
• AutoFact: PLAC8 domain containing protein 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PGPS/D12 2.799e-16
Putative C-terminus
sp_v3.0_unigene76610 SustainPine v3.0 258
• AutoFact: Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450 2.90797e-41
Internal
sp_v3.0_unigene76619 SustainPine v3.0 321
• AutoFact: RAD26-like SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q2_LACBS 1.0e-24
• FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
• Sma3: SNF2 super family 3.206e-32
Putative C-terminus
sp_v3.0_unigene76824 SustainPine v3.0 252
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 4.0e-30
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: Cellulose synthase 0.0
Putative C-terminus
sp_v3.0_unigene77251 SustainPine v3.0 339
• AutoFact: RING-H2 finger protein ATL1L, putative n=1 Tax=Ricinus communis RepID=B9S872_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene77315 SustainPine v3.0 480
• AutoFact: cellulose synthase-like protein D4 [Arabidopsis thaliana] sp|Q9SZL9.1|CSLD4_ARATH RecName: Full=Cellulose synthase-like protein D4; Short=AtCslD4 emb|CAB37559.1| putative protein [Arabidopsis thaliana] emb|CAB80484.1| putative protein [Arabidopsis thalian 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 1,3 1.608e-15
Internal
sp_v3.0_unigene77471 SustainPine v3.0 367
• AutoFact: PLAC8 domain containing protein 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative fw2.2 5.361e-06
N-terminus
sp_v3.0_unigene77648 SustainPine v3.0 371
• AutoFact: Receptor protein kinase-like n=1 Tax=Arabidopsis thaliana RepID=Q9LT97_ARATH 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 9.549e-14
Internal
sp_v3.0_unigene78668 SustainPine v3.0 134
• AutoFact: Unassigned protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene78750 SustainPine v3.0 170
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 8.043e-12
Internal
sp_v3.0_unigene79197 SustainPine v3.0 441
• AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJL1_PHYPA 0.0
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SNF2 family DNA-dependent ATPase 2.652e-06
Internal
sp_v3.0_unigene79435 SustainPine v3.0 310
• AutoFact: RING-finger protein n=1 Tax=Capsicum annuum RepID=Q08ET6_CAPAN 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 3.219e-21
Internal
sp_v3.0_unigene79524 SustainPine v3.0 205
• AutoFact: RING-H2 finger protein ATL77 [Arabidopsis thaliana] sp|Q9LS99.1|ATL77_ARATH RecName: Full=RING-H2 finger protein ATL77 dbj|BAB01804.1| unnamed protein product [Arabidopsis thaliana] gb|AAM64481.1| contains similarity to RING zinc finger protein [Arabidops 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL1R 2.827e-07
Internal
sp_v3.0_unigene80015 SustainPine v3.0 132
• AutoFact: Unassigned protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80651 SustainPine v3.0 213
• AutoFact: Cellulose synthase 5, glycosyltransferase family 2 n=3 Tax=Physcomitrella patens RepID=A9RUW7_PHYPA 5.0e-14
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 9.105e-29
Internal
sp_v3.0_unigene81211 SustainPine v3.0 178
• AutoFact: probable E3 ubiquitin-protein ligase makorin-2 [Takifugu rubripes] sp|Q5NU13.1|MKRN2_TAKRU RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2 dbj|BAD80900.1| makorin RING finger protein 2 [Takifugu rubripes] 5.0e-05
• FL-Next: sp=Zinc finger CCCH domain-containing protein 69; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene93573 SustainPine v3.0 2338
• AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 3.06e-09
Putative Complete
sp_v3.0_unigene93612 SustainPine v3.0 1821
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 9.648e-28
Putative Complete
sp_v3.0_unigene93626 SustainPine v3.0 2379
• AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 3.006e-09
Putative Complete
sp_v3.0_unigene93841 SustainPine v3.0 882
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain