Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene70411 SustainPine v3.0 207
AutoFact: Chromatin-remodeling factor CHD3 n=5 Tax=Oryza sativa RepID=Q5SML0_ORYSJ 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family chromodomain-helicase 4.19e-08
Internal
sp_v3.0_unigene70741 SustainPine v3.0 305
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 3.0e-30
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.739e-19
Internal
sp_v3.0_unigene71197 SustainPine v3.0 291
AutoFact: PLAC8 domain containing protein 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PGPS/D12 5.936e-20
Internal
sp_v3.0_unigene71422 SustainPine v3.0 320
AutoFact: C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] dbj|BAB09828.1| unnamed protein product [Arabidopsis thaliana] gb|AED93123.1| C3HC4-type RING finger domain-containing protein [Arabidopsis thaliana] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene71600 SustainPine v3.0 159
AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SINA6 1.1e-07
Internal
sp_v3.0_unigene72414 SustainPine v3.0 278
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 3.0e-31
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72481 SustainPine v3.0 276
AutoFact: Unassigned protein
FL-Next: sp=Probable E3 ubiquitin-protein ligase BAH1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene72765 SustainPine v3.0 280
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RDV9_PHYPA 1.0e-29
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73139 SustainPine v3.0 211
AutoFact: PLAC8 domain containing protein 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PGPS/D12 3.872e-16
Internal
sp_v3.0_unigene73690 SustainPine v3.0 342
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene73756 SustainPine v3.0 181
AutoFact: Unassigned protein 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene73923 SustainPine v3.0 419
AutoFact: DUF23 domain containing protein 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73976 SustainPine v3.0 373
AutoFact: Armadillo repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S778_RICCO 2.0e-07
FL-Next: tr=Armadillo repeat-containing protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene74219 SustainPine v3.0 295
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Zinc finger, C3HC4 type family protein 4.132e-06
Internal
sp_v3.0_unigene74423 SustainPine v3.0 143
AutoFact: cellulose synthase [Populus tremula x Populus tremuloides] 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 2.74654e-43
Internal
sp_v3.0_unigene74685 SustainPine v3.0 322
AutoFact: E3 ubiquitin-protein ligase BAH1 [Arabidopsis thaliana] sp|Q9SRX9.1|BAH1_ARATH RecName: Full=E3 ubiquitin-protein ligase BAH1; AltName: Full=Protein BENZOIC ACID HYPERSENSITIVE 1; AltName: Full=Protein NITROGEN LIMITATION ADAPTATION gb|AAF02879.1|AC009525 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene75317 SustainPine v3.0 223
AutoFact: RING-H2 finger protein ATL47 [Arabidopsis thaliana] sp|Q8GW38.1|ATL47_ARATH RecName: Full=RING-H2 finger protein ATL47 dbj|BAC43674.1| unknown protein [Arabidopsis thaliana] gb|AAQ55274.1| At1g23980 [Arabidopsis thaliana] gb|AEE30463.1| RING-H2 finger pro 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative RING finger 1 4.006e-14
Internal
sp_v3.0_unigene76072 SustainPine v3.0 246
AutoFact: Unassigned protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76363 SustainPine v3.0 391
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 1.0e-37
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain