Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene64780 SustainPine v3.0 204
AutoFact: E3 ubiquitin-protein ligase SINAT5 n=1 Tax=Arabidopsis thaliana RepID=SINA5_ARATH 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_203, whole genome shotgun sequence 1.173e-08
Internal
sp_v3.0_unigene64847 SustainPine v3.0 95
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65355 SustainPine v3.0 179
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RKN3_PHYPA 2.0e-22
FL-Next: tr=SNF2 family DNA-dependent ATPase; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene65480 SustainPine v3.0 364
AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: 26S proteasome non-ATPase regulatory subunit 14 9.67e-09
Complete
sp_v3.0_unigene65612 SustainPine v3.0 201
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 2.0e-18
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene65769 SustainPine v3.0 152
AutoFact: Unassigned protein
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene65853 SustainPine v3.0 215
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 1.0e-14
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 2.222e-34
Internal
sp_v3.0_unigene66487 SustainPine v3.0 390
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.337e-11
Internal
sp_v3.0_unigene67156 SustainPine v3.0 242
AutoFact: SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] gb|AEE28683.1| SNF2 , helicase and zinc-finger domain-containing protein [Arabidopsis thaliana] 5.0e-14
FL-Next: tr=Helicase-like transcription factor; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromatin remodeling complex subunit 2.964e-06
Internal
sp_v3.0_unigene67639 SustainPine v3.0 267
AutoFact: cellulose synthase-like protein G1 [Arabidopsis thaliana] sp|Q570S7.1|CSLG1_ARATH RecName: Full=Cellulose synthase-like protein G1; Short=AtCslG1 dbj|BAD95063.1| putative protein [Arabidopsis thaliana] gb|AEE84839.1| cellulose synthase-like protein G1 [Ar 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellulose synthase 2.872e-28
Internal
sp_v3.0_unigene67689 SustainPine v3.0 269
AutoFact: receptor protein kinase-like protein [Capsicum annuum] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Pto-like serine/threonine kinase 5.527e-16
Internal
sp_v3.0_unigene68134 SustainPine v3.0 268
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene68216 SustainPine v3.0 342
AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 4.041e-11
Internal
sp_v3.0_unigene68297 SustainPine v3.0 183
AutoFact: Nitric oxide synthase interacting protein n=4 Tax=Andropogoneae RepID=B4FLI7_MAIZE 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68686 SustainPine v3.0 321
AutoFact: putative RING zinc finger protein [Arabidopsis thaliana] 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 6.581e-06
Internal
sp_v3.0_unigene68735 SustainPine v3.0 253
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9STJ2_RICCO 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 2.683e-07
Internal
sp_v3.0_unigene69330 SustainPine v3.0 209
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAK82555.1| AT5g41350/MYC6_6 [Arabidopsis thaliana] gb|AAN28767.1| At5g41350/MYC6_6 [Arabidopsis thaliana] gb|AED94668.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene69620 SustainPine v3.0 219
AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] sp|Q9FN92.1|Y5597_ARATH RecName: Full=Probable receptor-like protein kinase At5g59700; Flags: Precursor dbj|BAB09508.1| receptor-like protein kinase [Arabidopsis thaliana] gb|AED97221.1| putativ 6.0e-14
FL-Next: sp=Probable receptor-like protein kinase At5g59700; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: FERONIA receptor-like kinase 4.73e-10
Internal
sp_v3.0_unigene69753 SustainPine v3.0 117
AutoFact: Putative zinc finger protein [Arabidopsis thaliana] 8.0e-07
FL-Next: sp=Zinc finger CCCH domain-containing protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RING finger protein 113A, putative 1.082e-09
Internal
sp_v3.0_unigene70169 SustainPine v3.0 426
AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain