Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene194286 SustainPine v3.0 252
AutoFact: Unassigned protein 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene194289 SustainPine v3.0 513
AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 0.0
FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Spinacia oleracea (Spinach). 0.0
Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene194612 SustainPine v3.0 197
AutoFact: RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4II36_ARATH 5.0e-14
FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene194651 SustainPine v3.0 284
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 6.0e-23
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: Vacuolar protein sorting-associated protein 41 homolog 4.688e-09
Internal
sp_v3.0_unigene195358 SustainPine v3.0 525
AutoFact: Cellulose synthase catalytic subunit n=2 Tax=Pinus RepID=Q5DI93_PINTA 4.0e-24
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
sp_v3.0_unigene195457 SustainPine v3.0 144
AutoFact: Unassigned protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene195459 SustainPine v3.0 262
AutoFact: ubiquitin ligase protein cop1, putative (EC:1.3.1.74); K10143 E3 ubiquitin-protein ligase RFWD2 [EC:6.3.2.19] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.451e-11
Internal
sp_v3.0_unigene195690 SustainPine v3.0 262
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42504.1| unknown protein [Arabidopsis thaliana] gb|ACN59279.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE36273.1| leucine-rich repeat protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.872e-13
Internal
sp_v3.0_unigene195963 SustainPine v3.0 186
AutoFact: cleavage and polyadenylation specificity factor subunit 3-II [Arabidopsis thaliana] sp|Q8GUU3.2|CPS3B_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 3-II; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa su 3.0e-24
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-II; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative cleavage and polyadenylation specifity factor 4.711e-09
Internal
sp_v3.0_unigene196035 SustainPine v3.0 181
AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene196280 SustainPine v3.0 119
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Primula vulgaris] 4.0e-11
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene196641 SustainPine v3.0 308
AutoFact: pfam12678, zf-rbx1, RING-H2 zinc finger 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene196777 SustainPine v3.0 298
AutoFact: Malectin/receptor-like protein kinase [Arabidopsis thaliana] sp|Q9SJT0.1|Y2214_ARATH RecName: Full=Probable receptor-like protein kinase At2g21480; Flags: Precursor gb|AAD23692.1| putative protein kinase [Arabidopsis thaliana] gb|AEC07184.1| Malectin/rece 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pto-like serine/threonine kinase 5.232e-15
Internal
sp_v3.0_unigene197768 SustainPine v3.0 283
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene198515 SustainPine v3.0 417
AutoFact: Unassigned protein 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene199056 SustainPine v3.0 143
AutoFact: Putative RING zinc finger protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S5X9_ORYSJ 2.0e-19
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein ariadne-1, putative 7.822e-08
Internal
sp_v3.0_unigene199920 SustainPine v3.0 307
AutoFact: PREDICTED: 60S ribosomal protein L7a [Apis mellifera] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7a, putative 1.408e-08
Putative C-terminus
sp_v3.0_unigene200513 SustainPine v3.0 371
AutoFact: Ribosomal protein L7a (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7E8_9MOLL 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7a, putative 9.264e-09
N-terminus
sp_v3.0_unigene200758 SustainPine v3.0 612
AutoFact: RNA-binding protein n=2 Tax=Andropogoneae RepID=B6TCP4_MAIZE 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene201071 SustainPine v3.0 199
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain