Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene166930 SustainPine v3.0 492
• AutoFact: Ribosome biogenesis protein NSA2 n=4 Tax=Pleosporineae RepID=NSA2_PHANO 8.40779e-45
• FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
C-terminus
sp_v3.0_unigene167116 SustainPine v3.0 104
• AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42504.1| unknown protein [Arabidopsis thaliana] gb|ACN59279.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE36273.1| leucine-rich repeat protein 2.0e-09
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Receptor protein kinase-like 7.45e-10
Internal
sp_v3.0_unigene167273 SustainPine v3.0 319
• AutoFact: Protein binding protein n=2 Tax=Zea mays RepID=B6SUL2_MAIZE 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene167290 SustainPine v3.0 222
• AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAD25789.1|AC006577_25 Contains similarity to gb|U45880 X-linked inhibitor of apotosis protein from Homo sapiens and contains PF|00097 Zinc finger C3HC4 (Ring finger) domain [Arabidopsis thaliana] 0.0001
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167302 SustainPine v3.0 204
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 2.231e-08
Internal
sp_v3.0_unigene167341 SustainPine v3.0 197
• AutoFact: Chromatin-remodeling factor CHD3 n=5 Tax=Oryza sativa RepID=Q5SML0_ORYSJ 2.0e-06
• FL-Next: tr=Chromatin-remodeling factor CHD3; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene167440 SustainPine v3.0 240
• AutoFact: putative RING-H2 zinc finger protein ATL3 [Arabidopsis thaliana] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167526 SustainPine v3.0 97
• AutoFact: Unassigned protein 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167536 SustainPine v3.0 239
• AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene167741 SustainPine v3.0 273
• AutoFact: putative kinesin [Arabidopsis thaliana] 1.00053e-42
• FL-Next: sp=Kinesin-like protein FLA10; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Sma3: Kinesin heavy chain, putative 3.782e-15
Internal
sp_v3.0_unigene167804 SustainPine v3.0 194
• AutoFact: IBR domain containing protein 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168007 SustainPine v3.0 315
• AutoFact: V-type proton ATPase subunit G n=1 Tax=Citrus limon RepID=VATG_CITLI 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar ATP synthase subunit G plant, putative 8.321e-13
N-terminus
sp_v3.0_unigene168343 SustainPine v3.0 117
• AutoFact: Lectin receptor-type kinase n=2 Tax=Triticeae RepID=B8XSN7_AEGTA 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 1.35e-15
Internal
sp_v3.0_unigene182950 SustainPine v3.0 380
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene182991 SustainPine v3.0 614
• AutoFact: Receptor-kinase, putative n=1 Tax=Ricinus communis RepID=B9SZK5_RICCO 5.0e-39
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 9.903e-21
Internal
sp_v3.0_unigene183008 SustainPine v3.0 1062
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene183012 SustainPine v3.0 574
• AutoFact: Unassigned protein 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183721 SustainPine v3.0 379
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0S4_RICCO 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 2.587e-08
C-terminus
sp_v3.0_unigene183764 SustainPine v3.0 790
• AutoFact: E3 ubiquitin-protein ligase ATL42 n=2 Tax=Arabidopsis RepID=ATL42_ARATH 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183928 SustainPine v3.0 561
• AutoFact: putative transcription factor [Arabidopsis thaliana] 2.0e-10
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain