Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene146685 SustainPine v3.0 667
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene147825 SustainPine v3.0 277
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene147954 SustainPine v3.0 587
AutoFact: Os07g0121200 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0D8X3_ORYSJ 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat, putative 5.025e-06
N-terminus
sp_v3.0_unigene147968 SustainPine v3.0 281
AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene148107 SustainPine v3.0 282
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene148137 SustainPine v3.0 490
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 3.00004e-41
FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: RNA-directed DNA polymerase (Reverse transcriptase) 9.831e-10
Putative N-terminus
sp_v3.0_unigene148311 SustainPine v3.0 412
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 1.0e-32
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.063e-12
Putative C-terminus
sp_v3.0_unigene148374 SustainPine v3.0 297
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148769 SustainPine v3.0 240
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRQ3_RICCO 3.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148784 SustainPine v3.0 320
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 1.0e-09
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene148835 SustainPine v3.0 290
AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Spotted leaf protein, putative 3.795e-08
Internal
sp_v3.0_unigene148847 SustainPine v3.0 341
AutoFact: Unassigned protein 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene148922 SustainPine v3.0 273
AutoFact: Copine family protein n=2 Tax=Zea mays RepID=B6TK33_MAIZE 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 8.743e-21
Internal
sp_v3.0_unigene149043 SustainPine v3.0 128
AutoFact: Pex2_Pex12 domain containing protein 5.0e-08
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149221 SustainPine v3.0 126
AutoFact: Transcription factor jumonji domain-containing protein n=2 Tax=Arabidopsis RepID=D7KN75_ARALL 3.0e-06
FL-Next: tr=Putative uncharacterized protein Sb01g015210; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene149244 SustainPine v3.0 198
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R995_RICCO 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 1.554e-24
Internal
sp_v3.0_unigene149327 SustainPine v3.0 333
AutoFact: Transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gb|AAM20342.1| unknown protein [Arabidopsis thaliana] gb|AEE81964.1| Transcription factor jumonji (jmjC) domain-cont 2.99878e-43
FL-Next: tr=Putative uncharacterized protein At4g00990; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ENBP1 protein 3.603e-08
Internal
sp_v3.0_unigene149427 SustainPine v3.0 178
AutoFact: Copine n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UFI4_9EUKA 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149471 SustainPine v3.0 250
AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 2.0e-08
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 9.004e-40
Internal
sp_v3.0_unigene149486 SustainPine v3.0 143
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYS0_PHYPA 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain