Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene131824 SustainPine v3.0 534
AutoFact: Os09g0327200 protein n=4 Tax=Oryza sativa RepID=Q0J2K9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.741e-12
Internal
sp_v3.0_unigene131925 SustainPine v3.0 370
AutoFact: DUF248 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin protein kinase-like 4.587e-18
Internal
sp_v3.0_unigene131964 SustainPine v3.0 364
AutoFact: Phd/F-box containing protein, putative n=1 Tax=Ricinus communis RepID=B9SQ16_RICCO 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PHD finger protein 1.047e-09
C-terminus
sp_v3.0_unigene132448 SustainPine v3.0 322
AutoFact: Unassigned protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene132449 SustainPine v3.0 222
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SMC2_RICCO 3.0e-23
FL-Next: tr=Protein binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene132488 SustainPine v3.0 472
AutoFact: copine-like protein [Oryza sativa Japonica Group] 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene132633 SustainPine v3.0 612
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6K7_RICCO 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ReMembR-H2 protein JR702, putative, expressed 1.093e-08
Internal
sp_v3.0_unigene132644 SustainPine v3.0 638
AutoFact: Os07g0121200 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q0D8X3_ORYSJ 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor kinase, putative, expressed 7.351e-07
Internal
sp_v3.0_unigene132668 SustainPine v3.0 514
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132792 SustainPine v3.0 587
AutoFact: RING-H2 finger protein ATL66 [Arabidopsis thaliana] sp|Q9SRM0.1|ATL66_ARATH RecName: Full=RING-H2 finger protein ATL66 gb|AAF01530.1|AC009991_26 hypothetical protein [Arabidopsis thaliana] gb|AAG50960.1|AC073395_2 RING zinc finger protein; 17145-17621 [Ar 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene132797 SustainPine v3.0 531
AutoFact: pfam00097, zf-C3HC4, Zinc finger, C3HC4 type (RING finger) 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132899 SustainPine v3.0 237
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 2.852e-08
Putative N-terminus
sp_v3.0_unigene133034 SustainPine v3.0 465
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 1.062e-24
Internal
sp_v3.0_unigene133205 SustainPine v3.0 503
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.585e-09
N-terminus
sp_v3.0_unigene133320 SustainPine v3.0 440
AutoFact: Unassigned protein 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene133349 SustainPine v3.0 456
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Zinc finger, C3HC4 type family protein 1.569e-07
Internal
sp_v3.0_unigene133359 SustainPine v3.0 220
AutoFact: Unassigned protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene133363 SustainPine v3.0 481
AutoFact: Unassigned protein 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene133460 SustainPine v3.0 283
AutoFact: F7G19.7 protein n=1 Tax=Arabidopsis thaliana RepID=O04024_ARATH 3.0e-13
FL-Next: tr=F7G19.7 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene133585 SustainPine v3.0 163
AutoFact: Di19 domain containing protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fiber protein Fb2 2.359e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain