Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene18189 SustainPine v3.0 572
• AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein 27C, putative 1.259e-15
N-terminus
sp_v3.0_unigene18340 SustainPine v3.0 969
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.791e-37
Putative C-terminus
sp_v3.0_unigene18391 SustainPine v3.0 2238
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18533 SustainPine v3.0 1224
• AutoFact: putative protein kinase [Zea mays] gb|ABM21450.1| putative protein kinase [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase PBS1, putative 5.48e-13
C-terminus
sp_v3.0_unigene18588 SustainPine v3.0 1141
• AutoFact: Pto-interacting protein 1 n=2 Tax=Solanoideae RepID=PTI1_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor serine-threonine protein kinase, putative 9.131e-10
N-terminus
sp_v3.0_unigene18593 SustainPine v3.0 1211
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851156.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974908.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAN13007.1| unknown protein [Arabidops 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18642 SustainPine v3.0 693
• AutoFact: putative transcription factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene18644 SustainPine v3.0 808
• AutoFact: BAL-associated protein [Tetrahymena thermophila] gb|EAS07476.1| BAL-associated protein [Tetrahymena thermophila SB210] 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene18673 SustainPine v3.0 659
• AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AAK44172.1|AF370357_1 unknown protein [Arabidopsis thaliana] gb|AAL15193.1| unknown protein [Arabidopsis thaliana] gb|AAM61248.1| unknown [Arabidopsis thaliana] gb|AEE35285.1| C3HC4-type RING finger 9.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene18699 SustainPine v3.0 1560
• AutoFact: IBR domain containing protein 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene18773 SustainPine v3.0 2079
• AutoFact: putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] sp|Q9ZUI0.1|Y2241_ARATH RecName: Full=Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130; Flags: Precursor gb|AAD03374.1| putative receptor- 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Serine-threonine protein kinase, plant-type, putative 1.7e-12
Putative C-terminus
sp_v3.0_unigene18785 SustainPine v3.0 880
• AutoFact: fiber protein Fb2 [Gossypium barbadense] 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fiber protein Fb2 1.509e-07
N-terminus
sp_v3.0_unigene18787 SustainPine v3.0 1002
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 5.667e-19
C-terminus
sp_v3.0_unigene18829 SustainPine v3.0 775
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18836 SustainPine v3.0 718
• AutoFact: UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 0.0
C-terminus
sp_v3.0_unigene18850 SustainPine v3.0 1037
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene19201 SustainPine v3.0 2678
• AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 5.512e-22
Complete
sp_v3.0_unigene19333 SustainPine v3.0 663
• AutoFact: contains region of similarity to beta transducin family [Arabidopsis thaliana] emb|CAB80889.1| AT4g00800 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene19453 SustainPine v3.0 651
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 2.051e-26
Internal
sp_v3.0_unigene19868 SustainPine v3.0 468
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9STH4_RICCO 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain