Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13584 SustainPine v3.0 831
AutoFact: Unassigned protein
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene13586 SustainPine v3.0 557
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR20753.1| At1g68180 [Arabidopsis thaliana] gb|AAX22268.1| At1g68180 [Arabidopsis thaliana] gb|AAZ14055.1| At1g68180 [Arabidopsis thaliana] gb|AEE34760.1| RING/U-box domain-containing protein 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene13677 SustainPine v3.0 957
AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T9S4_RICCO 0.0
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Kinase, putative 1.496e-06
Internal
sp_v3.0_unigene13688 SustainPine v3.0 1172
AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13721 SustainPine v3.0 1165
AutoFact: MAD domain containing protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: CONSTANS interacting protein 4 2.156e-12
Putative Complete
sp_v3.0_unigene13732 SustainPine v3.0 904
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42970.1| putative receptor like protein kinase [Arabidopsis thaliana] gb|ACN59402.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AED97645.1| leuci 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
N-terminus
sp_v3.0_unigene13742 SustainPine v3.0 1819
AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peroxisome biogenesis factor 10 4.688e-09
Complete
sp_v3.0_unigene13797 SustainPine v3.0 1155
AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849687.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849688.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13815 SustainPine v3.0 2537
AutoFact: putative methyltransferase PMT12 [Arabidopsis thaliana] sp|Q9FG39.1|PMTC_ARATH RecName: Full=Probable methyltransferase PMT12 dbj|BAB10206.1| ankyrin-like protein [Arabidopsis thaliana] gb|AAU05491.1| At5g06050 [Arabidopsis thaliana] gb|AAW80868.1| At5g06 0.0
FL-Next: sp=Probable methyltransferase PMT12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP binding protein, putative 9.476e-24
Complete
sp_v3.0_unigene13870 SustainPine v3.0 1891
AutoFact: E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana] sp|Q94AY3.1|DRIP2_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP2; AltName: Full=DREB2A-interacting protein 2 gb|AAK73976.1| At2g30580/T6B20.7 [Arabidopsis thaliana] gb|AAB63079.2| putative C3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 3.638e-06
Complete
sp_v3.0_unigene13902 SustainPine v3.0 770
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13961 SustainPine v3.0 436
AutoFact: zinc finger family protein [Picea abies] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-H2 finger protein ATL2M 4.997e-12
Internal
sp_v3.0_unigene14027 SustainPine v3.0 1001
AutoFact: Nuclear transcription factor, X-box binding, putative n=1 Tax=Ricinus communis RepID=B9T565_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene14030 SustainPine v3.0 992
AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene14065 SustainPine v3.0 888
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein SUPPRESSOR OF GENE SILENCING 3 2.694e-09
Putative C-terminus
sp_v3.0_unigene14118 SustainPine v3.0 2856
AutoFact: putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methylt 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 7.909e-20
Putative Complete
sp_v3.0_unigene14208 SustainPine v3.0 3164
AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14264 SustainPine v3.0 780
AutoFact: Mandelonitrile lyase n=3 Tax=Zea mays RepID=B6SVJ2_MAIZE 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative N-terminus
sp_v3.0_unigene14281 SustainPine v3.0 1011
AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 3.55e-19
C-terminus
sp_v3.0_unigene14304 SustainPine v3.0 4542
AutoFact: JmjC multi-domain protein 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.484e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain