Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11840 SustainPine v3.0 2256
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Senescence-associated-like protein 1.295e-08
Complete
sp_v3.0_unigene11843 SustainPine v3.0 1542
• AutoFact: F-box protein SKIP5 [Arabidopsis thaliana] sp|Q94FT2.1|SKIP5_ARATH RecName: Full=F-box protein SKIP5; AltName: Full=SKP1-interacting partner 5 gb|AAK61345.1|AF347972_1 SKP1-interacting partner 5 [Arabidopsis thaliana] gb|AAM61599.1| SKP1 interacting partn 0.0
• FL-Next: sp=F-box protein SKIP5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene11877 SustainPine v3.0 1947
• AutoFact: DUF1117 multi-domain protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 6.964e-06
C-terminus
sp_v3.0_unigene11920 SustainPine v3.0 1508
• AutoFact: GATA-N domain containing protein 6.0e-06
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene11934 SustainPine v3.0 1491
• AutoFact: RING finger-like protein [Oryza sativa Japonica Group] dbj|BAB90773.1| RING finger-like protein [Oryza sativa Japonica Group] dbj|BAG89633.1| unnamed protein product [Oryza sativa Japonica Group] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11940 SustainPine v3.0 603
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene11943 SustainPine v3.0 938
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene11949 SustainPine v3.0 1499
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12027 SustainPine v3.0 1846
• AutoFact: Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] dbj|BAF00863.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86755.1| Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12046 SustainPine v3.0 2103
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SZY8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger-like 9.201e-07
Complete
sp_v3.0_unigene12119 SustainPine v3.0 708
• AutoFact: Putative zinc finger protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6L4V6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene12148 SustainPine v3.0 1459
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 5.0e-16
• FL-Next: sp=E3 ubiquitin-protein ligase RHA2A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12309 SustainPine v3.0 946
• AutoFact: UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RLH6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 8.12753e-44
C-terminus
sp_v3.0_unigene12463 SustainPine v3.0 1139
• AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene12465 SustainPine v3.0 2083
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene12473 SustainPine v3.0 870
• AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative ubiquitin conjugating enzyme 7 interacting protein 4 4.959e-09
C-terminus
sp_v3.0_unigene12529 SustainPine v3.0 2612
• AutoFact: U-box domain-containing protein 30 [Arabidopsis thaliana] sp|Q058P4.1|PUB30_ARATH RecName: Full=U-box domain-containing protein 30; AltName: Full=Plant U-box protein 30 gb|ABJ17109.1| At3g49810 [Arabidopsis thaliana] gb|AEE78593.1| U-box domain-containing 0.0
• FL-Next: sp=U-box domain-containing protein 30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 5.007e-07
Complete
sp_v3.0_unigene12543 SustainPine v3.0 2123
• AutoFact: RING-H2 finger protein ATL52 [Arabidopsis thaliana] sp|Q9LF64.1|ATL52_ARATH RecName: Full=RING-H2 finger protein ATL52 emb|CAC01904.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] gb|AED92447.1| RING-H2 finger protein ATL52 [Arabidopsis thalian 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12719 SustainPine v3.0 454
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAB71884.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAO29956.1| putative zinc-finger protein [Arabidopsis thaliana] gb|AAQ56798.1| At3g62240 [Arabidopsis thaliana] gb|AEE80326. 9.80909e-45
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Putative zinc-finger protein 5.349e-07
Internal
sp_v3.0_unigene12737 SustainPine v3.0 2044
• AutoFact: cellulose synthase-like protein OsCslE2 [Oryza sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_296, whole genome shotgun sequence 2.873e-17
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain