Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene9778 SustainPine v3.0 1197
• AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9792 SustainPine v3.0 2331
• AutoFact: DUF1644 domain containing protein 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene9811 SustainPine v3.0 488
• AutoFact: Receptor-like protein kinase (Fragment) n=1 Tax=Glycine max RepID=Q9SEW3_SOYBN 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lectin-like receptor kinase 7 1.5e-19
Internal
sp_v3.0_unigene9815 SustainPine v3.0 2532
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAN71920.1| unknown protein [Arabidopsis thaliana] gb|AAY57597.1| RING finger family protein [Arabidopsis thaliana] gb|AEE74256.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 7.0e-25
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene9876 SustainPine v3.0 3404
• AutoFact: putative serine/threonine-specific protein kinase [Oryza sativa Japonica Group] gb|EAZ41462.1| hypothetical protein OsJ_25984 [Oryza sativa Japonica Group] dbj|BAH00920.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Serine/threonine-specific protein kinase-like protein 3.733e-09
Complete
sp_v3.0_unigene9936 SustainPine v3.0 1828
• AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 9.136e-18
Complete
sp_v3.0_unigene10125 SustainPine v3.0 1462
• AutoFact: E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana] sp|Q9M2S6.1|SDIR1_ARATH RecName: Full=E3 ubiquitin-protein ligase SDIR1; AltName: Full=Protein salt- and drought-induced RING finger1 gb|AAK62440.1|AF386995_1 putative protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10231 SustainPine v3.0 1171
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 1.482e-29
C-terminus
sp_v3.0_unigene10241 SustainPine v3.0 4734
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene10258 SustainPine v3.0 1372
• AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 1.066e-20
C-terminus
sp_v3.0_unigene10265 SustainPine v3.0 355
• AutoFact: contains similarity to C3HC4-type zinc fingers (Pfam:zf-C3HC4.hmm, score: 34.87) [Arabidopsis thaliana] 5.0e-12
• FL-Next: tr=F8M12.8 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene10317 SustainPine v3.0 1538
• AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Somatic embryogenesis receptor kinase, putative 1.303e-09
Putative N-terminus
sp_v3.0_unigene10374 SustainPine v3.0 924
• AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 4.978e-16
Complete
sp_v3.0_unigene10550 SustainPine v3.0 471
• AutoFact: Os07g0575600 protein n=2 Tax=Oryza sativa RepID=Q8LIP2_ORYSJ 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr8 scaffold_115, whole genome shotgun sequence 7.182e-08
Internal
sp_v3.0_unigene10578 SustainPine v3.0 3522
• AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene10593 SustainPine v3.0 669
• AutoFact: Receptor kinase Lecrk n=1 Tax=Gossypium hirsutum RepID=Q7Y0Y5_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 1.941e-26
Internal
sp_v3.0_unigene10602 SustainPine v3.0 2477
• AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 5.257e-07
Complete
sp_v3.0_unigene10613 SustainPine v3.0 1512
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene10766 SustainPine v3.0 1118
• AutoFact: RING-H2 finger protein ATL40 [Arabidopsis thaliana] sp|Q9SLC4.1|ATL40_ARATH RecName: Full=RING-H2 finger protein ATL40 gb|AAD23718.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAR24220.1| At2g42350 [Arabidopsis thaliana] gb|AAR92359.1| A 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10803 SustainPine v3.0 1252
• AutoFact: FANCL_C multi-domain protein 3.0e-06
• FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain