Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7885 SustainPine v3.0 1589
• AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7934 SustainPine v3.0 1511
• AutoFact: Polyketide_cyc2 multi-domain protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 4.599e-16
Complete
sp_v3.0_unigene7968 SustainPine v3.0 3172
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7978 SustainPine v3.0 645
• AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene7998 SustainPine v3.0 1958
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8001 SustainPine v3.0 1606
• AutoFact: DNA binding; K10639 E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] 0.0
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene8019 SustainPine v3.0 1352
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: FERONIA receptor-like kinase 1.169e-17
Putative C-terminus
sp_v3.0_unigene8033 SustainPine v3.0 1027
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Putative uncharacterized protein At3g07610 3.208e-08
Internal
sp_v3.0_unigene8072 SustainPine v3.0 2908
• AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: IBR domain containing protein, expressed 8.941e-08
C-terminus
sp_v3.0_unigene8168 SustainPine v3.0 912
• AutoFact: SRC2 protein n=1 Tax=Taiwania cryptomerioides RepID=A7XAJ8_9CONI 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene8172 SustainPine v3.0 2152
• AutoFact: MAD domain containing protein 3.0e-05
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: CONSTANS interacting protein 4 1.217e-12
Putative Complete
sp_v3.0_unigene8191 SustainPine v3.0 1404
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUV3_RICCO 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 6.503e-06
C-terminus
sp_v3.0_unigene8206 SustainPine v3.0 2534
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein ariadne-1, putative 1.068e-10
Complete
sp_v3.0_unigene8244 SustainPine v3.0 2333
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T5Z3_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Complete
sp_v3.0_unigene8264 SustainPine v3.0 1671
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene8292 SustainPine v3.0 1694
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 3.49e-08
C-terminus
sp_v3.0_unigene8313 SustainPine v3.0 1209
• AutoFact: PMG domain containing protein 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene8332 SustainPine v3.0 1686
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING zinc finger protein-like 3.649e-13
Complete
sp_v3.0_unigene8439 SustainPine v3.0 1295
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42417.1| unknown protein [Arabidopsis thaliana] gb|AAP68217.1| At3g05250 [Arabidopsis thaliana] gb|AAZ14063.1| At3g05250 [Arabidopsis thaliana] gb|AEE74211.1| RING/U-box domain-containing 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: T12H1.22 protein 9.747e-06
C-terminus
sp_v3.0_unigene8503 SustainPine v3.0 2014
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized protein At4g10930; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome chr2 scaffold_176, whole genome shotgun sequence 2.092e-07
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain