Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene186629 SustainPine v3.0 322
• AutoFact: pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase 7.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: UDP-glucosyltransferase, putative 0.0
Internal
sp_v3.0_unigene186722 SustainPine v3.0 1239
• AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93462.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 1.579e-23
Putative Complete
sp_v3.0_unigene186911 SustainPine v3.0 466
• AutoFact: RING-H2 finger protein ATL44 n=2 Tax=Arabidopsis RepID=ATL44_ARATH 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL5A 4.793e-11
C-terminus
sp_v3.0_unigene187035 SustainPine v3.0 390
• AutoFact: Unassigned protein 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene187759 SustainPine v3.0 628
• AutoFact: C3HC4-type RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD31446.1| C3HC4-type RING zinc finger protein-like [Oryza sativa Japonica Group] 6.0e-19
• FL-Next: sp=Putative RING-H2 finger protein ATL71; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene188396 SustainPine v3.0 549
• AutoFact: ribosomal protein L7A [Bombyx mori] gb|AAV34817.1| ribosomal protein L7A [Bombyx mori] 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.032e-08
Putative C-terminus
sp_v3.0_unigene188787 SustainPine v3.0 616
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similarity to RING zinc finger protein 7.397e-08
C-terminus
sp_v3.0_unigene188942 SustainPine v3.0 492
• AutoFact: 60S ribosomal protein L7a [Neosartorya fischeri NRRL 181] gb|EAW16542.1| 60S ribosomal protein L7a [Neosartorya fischeri NRRL 181] 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.023e-08
Putative C-terminus
sp_v3.0_unigene189087 SustainPine v3.0 399
• AutoFact: Glycogen synthase kinase-3 beta, putative n=1 Tax=Ricinus communis RepID=B9RDL4_RICCO 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycogen synthase kinase-3 beta, putative 6.591e-21
Internal
sp_v3.0_unigene189105 SustainPine v3.0 698
• AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene189297 SustainPine v3.0 1500
• AutoFact: Ribosomal protein S8e family protein [Arabidopsis thaliana] dbj|BAB08958.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24082.1| unknown protein [Arabidopsis thaliana] gb|AAM45100.1| unknown protein [Arabidopsis thaliana] gb|AED91006.1| Ribosomal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TGF-beta inducible protein 1.39e-09
Complete
sp_v3.0_unigene189598 SustainPine v3.0 531
• AutoFact: E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana] sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName: Full=RING-H2 finger protein ATL42; Flags: Precursor emb|CAB43903.1| putative protein [Arabidopsis thaliana] emb|CAB8 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene189653 SustainPine v3.0 505
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AED91346.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative Complete
sp_v3.0_unigene189664 SustainPine v3.0 491
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAD10644.1| Unknown protein [Arabidopsis thaliana] gb|AAK62663.1| At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAN18071.1| At1g 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene190379 SustainPine v3.0 338
• AutoFact: ring finger [Aedes aegypti] gb|ABF18349.1| SCF ubiquitin ligase Rbx1 component [Aedes aegypti] gb|EAT43885.1| ring finger [Aedes aegypti] 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 1.026e-16
N-terminus
sp_v3.0_unigene190903 SustainPine v3.0 773
• AutoFact: E3 ubiquitin-protein ligase ATL42 n=2 Tax=Arabidopsis RepID=ATL42_ARATH 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene191624 SustainPine v3.0 381
• AutoFact: RING-H2 finger protein ATL72 [Arabidopsis thaliana] sp|Q9SG96.1|ATL72_ARATH RecName: Full=RING-H2 finger protein ATL72 gb|AAF19558.1|AC011708_1 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAO44037.1| At3g10910 [Arabidopsis thaliana] dbj|BA 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL5A 1.041e-11
Putative C-terminus
sp_v3.0_unigene191741 SustainPine v3.0 346
• AutoFact: RING-box protein 1 n=5 Tax=leotiomyceta RepID=A7E405_SCLS1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 2.48e-16
C-terminus
sp_v3.0_unigene192162 SustainPine v3.0 813
• AutoFact: ribosomal protein L7a [Argopecten irradians] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.514e-08
Complete
sp_v3.0_unigene192667 SustainPine v3.0 439
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain