Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene168007 SustainPine v3.0 315
• AutoFact: V-type proton ATPase subunit G n=1 Tax=Citrus limon RepID=VATG_CITLI 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar ATP synthase subunit G plant, putative 8.321e-13
N-terminus
sp_v3.0_unigene168343 SustainPine v3.0 117
• AutoFact: Lectin receptor-type kinase n=2 Tax=Triticeae RepID=B8XSN7_AEGTA 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 1.35e-15
Internal
sp_v3.0_unigene182950 SustainPine v3.0 380
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene183008 SustainPine v3.0 1062
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene183012 SustainPine v3.0 574
• AutoFact: Unassigned protein 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183195 SustainPine v3.0 878
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Membrane associated ring finger 1,8, putative 3.317e-08
Putative C-terminus
sp_v3.0_unigene183721 SustainPine v3.0 379
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0S4_RICCO 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 2.587e-08
C-terminus
sp_v3.0_unigene183764 SustainPine v3.0 790
• AutoFact: E3 ubiquitin-protein ligase ATL42 n=2 Tax=Arabidopsis RepID=ATL42_ARATH 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183937 SustainPine v3.0 346
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAG12602.1|AC068900_8 RING zinc-finger protein, putative; 7563-8792 [Arabidopsis thaliana] gb|AAP12856.1| At3g02340 [Arabidopsis thaliana] dbj|BAE99789.1| hypothetical protein [Arabidopsis tha 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 2.456e-06
Internal
sp_v3.0_unigene184028 SustainPine v3.0 411
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene184269 SustainPine v3.0 1201
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene184287 SustainPine v3.0 688
• AutoFact: Unassigned protein 8.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene184470 SustainPine v3.0 546
• AutoFact: E3 ubiquitin-protein ligase ATL42 n=2 Tax=Arabidopsis RepID=ATL42_ARATH 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene184696 SustainPine v3.0 464
• AutoFact: JmjC domain containing protein 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 4.799e-08
Putative Complete
sp_v3.0_unigene184843 SustainPine v3.0 487
• AutoFact: RING-H2 finger protein RHA1a [Arabidopsis thaliana] gb|AAM63325.1| RING-H2 finger protein RHA1a-like protein [Arabidopsis thaliana] 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene185141 SustainPine v3.0 575
• AutoFact: C3HC4-type RING finger domain-containing protein n=4 Tax=Arabidopsis RepID=Q9FN44_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene185638 SustainPine v3.0 474
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AT-rich element binding factor 3 4.418e-16
C-terminus
sp_v3.0_unigene185726 SustainPine v3.0 380
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene186176 SustainPine v3.0 883
• AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 2.0e-23
• FL-Next: sp=Glycine-rich RNA-binding protein 2, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein 27C, putative 1.259e-15
Complete
sp_v3.0_unigene186410 SustainPine v3.0 483
• AutoFact: 60S ribosomal protein L7a-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MXP8_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.124e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain