Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene165462 SustainPine v3.0 465
• AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene165848 SustainPine v3.0 258
• AutoFact: Transcription factor jumonji domain-containing protein n=2 Tax=Arabidopsis RepID=D7KN75_ARALL 1.0e-27
• FL-Next: tr=Transcription factor jumonji domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: ENBP1 protein 3.421e-08
Internal
sp_v3.0_unigene165868 SustainPine v3.0 486
• AutoFact: RING-H2 finger protein ATL67 [Arabidopsis thaliana] sp|O82353.1|ATL67_ARATH RecName: Full=RING-H2 finger protein ATL67 gb|AAC62890.1| hypothetical protein [Arabidopsis thaliana] gb|AAL69457.1| At2g46160/T3F17.19 [Arabidopsis thaliana] gb|AEC10650.1| RING- 2.0e-11
• FL-Next: sp=RING-H2 finger protein ATL67; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene165970 SustainPine v3.0 462
• AutoFact: L-type lectin-domain containing receptor kinase IV.2 n=2 Tax=Arabidopsis RepID=LRK42_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 1.037e-26
Internal
sp_v3.0_unigene166084 SustainPine v3.0 112
• AutoFact: Unassigned protein 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166134 SustainPine v3.0 429
• AutoFact: RecName: Full=Pto-interacting protein 1; Short=Pti1; AltName: Full=Pto kinase interactor 1 gb|AAC61805.1| Pto kinase interactor 1 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Pti1-like kinase 9.34e-11
Internal
sp_v3.0_unigene166207 SustainPine v3.0 273
• AutoFact: Unassigned protein 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166331 SustainPine v3.0 340
• AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AAL66968.1| unknown protein [Arabidopsis thaliana] gb|AAL91189.1| putative protein [Arabidopsis thaliana] gb|AAM20289.1| unknown protein [Arabidopsis thaliana] gb|AEE86087.1| C3H4 type zinc finger pr 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Ring finger protein, putative 6.119e-06
Internal
sp_v3.0_unigene166339 SustainPine v3.0 222
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM40_MARPO 1.0e-21
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Kinase, putative 1.3e-13
Internal
sp_v3.0_unigene166567 SustainPine v3.0 368
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 6.165e-14
Internal
sp_v3.0_unigene166806 SustainPine v3.0 370
• AutoFact: RING-H2 finger protein ATL40 n=1 Tax=Arabidopsis thaliana RepID=ATL40_ARATH 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene166865 SustainPine v3.0 408
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene166871 SustainPine v3.0 337
• AutoFact: Unassigned protein 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166923 SustainPine v3.0 458
• AutoFact: 60S ribosomal protein L7a-1 n=4 Tax=Arabidopsis RepID=RL7A1_ARATH 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.023e-08
C-terminus
sp_v3.0_unigene166930 SustainPine v3.0 492
• AutoFact: Ribosome biogenesis protein NSA2 n=4 Tax=Pleosporineae RepID=NSA2_PHANO 8.40779e-45
• FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
C-terminus
sp_v3.0_unigene167273 SustainPine v3.0 319
• AutoFact: Protein binding protein n=2 Tax=Zea mays RepID=B6SUL2_MAIZE 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene167302 SustainPine v3.0 204
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 2.231e-08
Internal
sp_v3.0_unigene167440 SustainPine v3.0 240
• AutoFact: putative RING-H2 zinc finger protein ATL3 [Arabidopsis thaliana] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167526 SustainPine v3.0 97
• AutoFact: Unassigned protein 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene167536 SustainPine v3.0 239
• AutoFact: E3 ubiquitin ligase-like protein [Arabidopsis thaliana] gb|AAM91555.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAN15327.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD43976.1| unknown protein [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain