Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene162037 SustainPine v3.0 344
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 5.487e-10
Putative C-terminus
sp_v3.0_unigene162273 SustainPine v3.0 339
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 8.0e-35
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 3.387e-25
Internal
sp_v3.0_unigene162333 SustainPine v3.0 163
• AutoFact: Metal transport protein n=1 Tax=Medicago truncatula RepID=Q6VM15_MEDTR 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative zinc transporter 7.889e-17
Internal
sp_v3.0_unigene162690 SustainPine v3.0 424
• AutoFact: Protein translocase subunit secA n=1 Tax=Ricinus communis RepID=B9S2U6_RICCO 0.0
• FL-Next: sp=Protein translocase subunit SECA2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Protein translocase subunit secA 0.0
Internal
sp_v3.0_unigene163080 SustainPine v3.0 360
• AutoFact: Copine (Calcium-dependent phospholipid-binding protein) family protein [Arabidopsis thaliana] gb|AEE34698.1| Copine (Calcium-dependent phospholipid-binding protein) family protein [Arabidopsis thaliana] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 6.434e-17
Internal
sp_v3.0_unigene163140 SustainPine v3.0 314
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene163305 SustainPine v3.0 326
• AutoFact: RVT_1 domain containing protein 1.0e-14
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene163408 SustainPine v3.0 407
• AutoFact: ATP-dependent RNA helicase (Fragment) n=1 Tax=Cucumis melo subsp. melo RepID=E5GBQ6_CUCME 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-dependent RNA helicase, putative 1.112e-31
Internal
sp_v3.0_unigene164041 SustainPine v3.0 238
• AutoFact: Ubiquitin-protein ligase n=1 Tax=Cucumis melo subsp. melo RepID=E5GC73_CUCME 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-protein ligase, putative 5.293e-06
Internal
sp_v3.0_unigene164119 SustainPine v3.0 320
• AutoFact: Unassigned protein 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164316 SustainPine v3.0 234
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene164502 SustainPine v3.0 314
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein Sb10g027165; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene164564 SustainPine v3.0 168
• AutoFact: Zinc finger (C3HC4-type RING finger)protein-like n=4 Tax=Poaceae RepID=Q67WE0_ORYSJ 2.0e-16
• FL-Next: tr=Putative uncharacterized protein Sb10g025050; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene164673 SustainPine v3.0 180
• AutoFact: 60S ribosomal protein L7a [Danio rerio] gb|AAH59533.1| Ribosomal protein L7a [Danio rerio] gb|AAH71352.1| Ribosomal protein L7a [Danio rerio] emb|CAN88769.1| ribosomal protein L7a [Danio rerio] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.264e-09
Internal
sp_v3.0_unigene164787 SustainPine v3.0 362
• AutoFact: ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973651.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973652.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] gb|AAB86443.1| expressed protein [Arabidopsi 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RHC1A 1.545e-16
Internal
sp_v3.0_unigene164869 SustainPine v3.0 349
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB36_RICCO 5.99756e-43
• FL-Next: sp=E3 ubiquitin-protein ligase SIS3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165106 SustainPine v3.0 164
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 2.046e-08
Putative N-terminus
sp_v3.0_unigene165137 SustainPine v3.0 266
• AutoFact: putative RING-H2 finger protein ATL50 [Arabidopsis thaliana] sp|Q9FHG8.1|ATL50_ARATH RecName: Full=Putative RING-H2 finger protein ATL50 dbj|BAB09593.1| unnamed protein product [Arabidopsis thaliana] gb|AED96946.1| putative RING-H2 finger protein ATL50 [A 7.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene165225 SustainPine v3.0 145
• AutoFact: Zinc-finger transcription factor n=1 Tax=Ananas comosus RepID=C0KYN2_ANACO 8.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene165411 SustainPine v3.0 436
• AutoFact: 60S ribosomal protein L8-B n=4 Tax=Pleosporineae RepID=B2VZ06_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.264e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain