Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene157656 SustainPine v3.0 528
• AutoFact: Ubiquitin-conjugating enzyme E2-binding protein 1 n=1 Tax=Ectocarpus siliculosus RepID=D8LCD0_ECTSI 0.0
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene157748 SustainPine v3.0 506
• AutoFact: DUF566 multi-domain protein 4.0e-07
• FL-Next: tr=Ribosome biogenesis protein NSA2 putative; Albugo laibachii Nc14. 0.0
Putative N-terminus
sp_v3.0_unigene157924 SustainPine v3.0 373
• AutoFact: 60S ribosomal protein L7a, putative n=3 Tax=Onchocercidae RepID=A8P4H1_BRUMA 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 8.439e-09
N-terminus
sp_v3.0_unigene158464 SustainPine v3.0 409
• AutoFact: WD repeat domain phosphoinositide-interacting protein 3 [Dictyostelium discoideum AX4] gb|EAL66150.1| WD repeat domain phosphoinositide-interacting protein 3 [Dictyostelium discoideum AX4] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat domain phosphoinositide-interacting protein 3 7.997e-09
Internal
sp_v3.0_unigene158793 SustainPine v3.0 393
• AutoFact: Unassigned protein 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene158867 SustainPine v3.0 203
• AutoFact: 60S ribosomal protein L7a-2 [Arabidopsis thaliana] sp|Q9LZH9.1|RL7A2_ARATH RecName: Full=60S ribosomal protein L7a-2 emb|CAB83137.1| 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] gb|AAK97734.1| AT3g62870/F26K9_300 [Arabidopsis thaliana] gb|AAL3 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 6.823e-09
Internal
sp_v3.0_unigene159082 SustainPine v3.0 314
• AutoFact: pfam07002, Copine, Copine 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 6.874e-21
Internal
sp_v3.0_unigene159511 SustainPine v3.0 360
• AutoFact: Unassigned protein 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene159571 SustainPine v3.0 238
• AutoFact: receptor protein kinase-like [Arabidopsis thaliana] 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 1.902e-12
Internal
sp_v3.0_unigene159597 SustainPine v3.0 406
• AutoFact: Putative receptor-type protein kinase LRK1 n=3 Tax=Oryza sativa RepID=Q8LIP0_ORYSJ 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-specific kinase like protein 2.531e-07
Internal
sp_v3.0_unigene159747 SustainPine v3.0 362
• AutoFact: Similarity to RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9LS98_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.886e-12
C-terminus
sp_v3.0_unigene159898 SustainPine v3.0 206
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: ENBP1 protein 6.118e-09
Internal
sp_v3.0_unigene159912 SustainPine v3.0 495
• AutoFact: Unassigned protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene160523 SustainPine v3.0 418
• AutoFact: RING finger 1-like [Oryza sativa Japonica Group] dbj|BAD72457.1| RING finger 1-like [Oryza sativa Japonica Group] gb|EAZ36081.1| hypothetical protein OsJ_20392 [Oryza sativa Japonica Group] 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene160834 SustainPine v3.0 316
• AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=A9P2G1_PICSI 1.0e-34
• FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pseudouridylate synthase 2.528e-06
Putative C-terminus
sp_v3.0_unigene160894 SustainPine v3.0 436
• AutoFact: Abscisic acid receptor PYL7 n=3 Tax=Brassicaceae RepID=PYL7_ARATH 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bet v I allergen-like 8.988e-18
Internal
sp_v3.0_unigene161074 SustainPine v3.0 464
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKE6_VITVI 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene161285 SustainPine v3.0 357
• AutoFact: receptor-like protein kinase THESEUS 1 [Arabidopsis thaliana] sp|Q9LK35.1|THE1_ARATH RecName: Full=Receptor-like protein kinase THESEUS 1; Flags: Precursor dbj|BAA98098.1| receptor-protein kinase-like protein [Arabidopsis thaliana] gb|AED96490.1| receptor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: FERONIA receptor-like kinase 5.431e-18
Internal
sp_v3.0_unigene161386 SustainPine v3.0 334
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene161702 SustainPine v3.0 403
• AutoFact: Unassigned protein 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain