Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene151450 SustainPine v3.0 315
• AutoFact: ribosomal protein L7A [Bigelowiella natans] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.251e-08
Internal
sp_v3.0_unigene152401 SustainPine v3.0 413
• AutoFact: 60S ribosomal protein l7a [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.49e-08
Putative C-terminus
sp_v3.0_unigene153489 SustainPine v3.0 441
• AutoFact: 60S ribosomal protein L7a-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MXP8_PHYIT 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.023e-08
C-terminus
sp_v3.0_unigene153508 SustainPine v3.0 176
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene153777 SustainPine v3.0 307
• AutoFact: Ribosomal protein L7a n=1 Tax=Pfiesteria piscicida RepID=E8Z674_PFIPI 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.083e-08
Internal
sp_v3.0_unigene154016 SustainPine v3.0 335
• AutoFact: PREDICTED: RING-box protein 1-like n=1 Tax=Macaca mulatta RepID=UPI0001D53DBD 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 9.865e-17
C-terminus
sp_v3.0_unigene154238 SustainPine v3.0 239
• AutoFact: Ribosomal protein L7Ae containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006D0064 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 4.959e-09
Internal
sp_v3.0_unigene154246 SustainPine v3.0 426
• AutoFact: ribosomal protein L7a [Xenopus (Silurana) tropicalis] gb|AAI18909.1| hypothetical protein LOC447981 [Xenopus (Silurana) tropicalis] 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.467e-08
C-terminus
sp_v3.0_unigene154436 SustainPine v3.0 565
• AutoFact: Ribosomal protein S8e containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB679 0.0
• FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
C-terminus
sp_v3.0_unigene154812 SustainPine v3.0 403
• AutoFact: 60S ribosomal protein L7a [Theileria parva strain Muguga] gb|EAN32369.1| 60S ribosomal protein L7a, putative [Theileria parva] 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.186e-08
C-terminus
sp_v3.0_unigene155346 SustainPine v3.0 295
• AutoFact: putative tyrosine-protein phosphatase [Arabidopsis thaliana] sp|Q9ZVN4.1|Y1500_ARATH RecName: Full=Probable tyrosine-protein phosphatase At1g05000 gb|AAC97999.1| ESTs gb|H36249, gb|AA59732 and gb|AA651219 come from this gene [Arabidopsis thaliana] gb|AAO6 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tyrosine specific protein phosphatase family protein 4.946e-16
N-terminus
sp_v3.0_unigene155618 SustainPine v3.0 458
• AutoFact: 60S ribosomal protein L7a-2 [Arabidopsis thaliana] sp|Q9LZH9.1|RL7A2_ARATH RecName: Full=60S ribosomal protein L7a-2 emb|CAB83137.1| 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] gb|AAK97734.1| AT3g62870/F26K9_300 [Arabidopsis thaliana] gb|AAL3 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.478e-08
Internal
sp_v3.0_unigene156069 SustainPine v3.0 248
• AutoFact: 60S ribosomal protein L7A, putative n=2 Tax=Sarcocystidae RepID=B9PKF7_TOXGO 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.062e-08
Internal
sp_v3.0_unigene156158 SustainPine v3.0 308
• AutoFact: RecName: Full=Anaphase-promoting complex subunit 11; AltName: Full=Cyclosome subunit 11 gb|AAL13436.1| anaphase promoting complex subunit 11 [Arabidopsis thaliana] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Anaphase promoting complex subunit 11 3.246e-09
Putative Complete
sp_v3.0_unigene156292 SustainPine v3.0 449
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156317 SustainPine v3.0 221
• AutoFact: ribosomal protein L7a [Xenopus (Silurana) tropicalis] gb|AAI18909.1| hypothetical protein LOC447981 [Xenopus (Silurana) tropicalis] 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.643e-09
Internal
sp_v3.0_unigene156361 SustainPine v3.0 330
• AutoFact: 60S ribosomal protein L8 (L7A) (L4) n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6RE46_CRYGW 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.835e-09
Internal
sp_v3.0_unigene156558 SustainPine v3.0 407
• AutoFact: 60S ribosomal protein L7a, putative n=3 Tax=Onchocercidae RepID=A8P4H1_BRUMA 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 8.71e-09
C-terminus
sp_v3.0_unigene156949 SustainPine v3.0 240
• AutoFact: Putative TGF-beta-inducible nuclear protein 1 n=1 Tax=Neospora caninum Liverpool RepID=F0VE44_NEOCA 2.0e-33
• FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
• Sma3: TGF-beta inducible protein 1.283e-09
Internal
sp_v3.0_unigene157288 SustainPine v3.0 456
• AutoFact: shaggy-related protein kinase 3 [Physcomitrella patens] gb|AAQ23113.1| shaggy-related protein kinase 3 [Physcomitrella patens] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycogen synthase kinase-3 beta, putative 9.311e-17
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain