Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene148374 SustainPine v3.0 297
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148769 SustainPine v3.0 240
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRQ3_RICCO 3.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148922 SustainPine v3.0 273
AutoFact: Copine family protein n=2 Tax=Zea mays RepID=B6TK33_MAIZE 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copine, putative 8.743e-21
Internal
sp_v3.0_unigene149043 SustainPine v3.0 128
AutoFact: Pex2_Pex12 domain containing protein 5.0e-08
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149327 SustainPine v3.0 333
AutoFact: Transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gb|AAM20342.1| unknown protein [Arabidopsis thaliana] gb|AEE81964.1| Transcription factor jumonji (jmjC) domain-cont 2.99878e-43
FL-Next: tr=Putative uncharacterized protein At4g00990; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ENBP1 protein 3.603e-08
Internal
sp_v3.0_unigene149427 SustainPine v3.0 178
AutoFact: Copine n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UFI4_9EUKA 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149486 SustainPine v3.0 143
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYS0_PHYPA 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene149523 SustainPine v3.0 169
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SCJ9_RICCO 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING finger and CHY zinc finger domain-containing protein 1 1.987e-11
Putative N-terminus
sp_v3.0_unigene149576 SustainPine v3.0 185
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SZ64_RICCO 8.0e-22
FL-Next: sp=E3 ubiquitin protein ligase DRIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ring finger protein, putative 2.319e-08
Internal
sp_v3.0_unigene149619 SustainPine v3.0 153
AutoFact: Unassigned protein 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene149651 SustainPine v3.0 105
AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-H2 finger protein ATL5A 4.278e-07
Internal
sp_v3.0_unigene149764 SustainPine v3.0 128
AutoFact: Unassigned protein 7.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149847 SustainPine v3.0 388
AutoFact: Unassigned protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene149873 SustainPine v3.0 292
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene149954 SustainPine v3.0 285
AutoFact: Os02g0109400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0E4N0_ORYSJ 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.609e-08
N-terminus
sp_v3.0_unigene150035 SustainPine v3.0 222
AutoFact: pfam00069, Pkinase, Protein kinase domain 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lectin-like receptor kinase 7 2.01e-09
Internal
sp_v3.0_unigene150080 SustainPine v3.0 159
AutoFact: Unassigned protein 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150656 SustainPine v3.0 266
AutoFact: RING-box protein 1 n=5 Tax=leotiomyceta RepID=A7E405_SCLS1 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-box protein 1a 8.757e-17
C-terminus
sp_v3.0_unigene151264 SustainPine v3.0 519
AutoFact: 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Dictyostelium purpureum RepID=F1A2S8_DICPU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxyisobutyrate dehydrogenase 4.361e-09
Putative C-terminus
sp_v3.0_unigene151372 SustainPine v3.0 413
AutoFact: 60S ribosomal protein L7A-like [Solanum tuberosum] 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L7a, putative 1.467e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain