Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene141527 SustainPine v3.0 292
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mahogunin, putative 2.407e-12
C-terminus
sp_v3.0_unigene141581 SustainPine v3.0 328
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDM6_RICCO 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein RHF2a, putative, expressed 2.103e-08
N-terminus
sp_v3.0_unigene141623 SustainPine v3.0 343
• AutoFact: Pspzf zinc finger protein-like [Arabidopsis thaliana] 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene141779 SustainPine v3.0 347
• AutoFact: C3HC4-type RING finger protein n=1 Tax=Arabidopsis thaliana RepID=F4I1E4_ARATH 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene141978 SustainPine v3.0 394
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3H0_RICCO 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene142024 SustainPine v3.0 266
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Zinc finger (C3HC4-type RING finger) protein-like 2.633e-08
Internal
sp_v3.0_unigene142026 SustainPine v3.0 876
• AutoFact: RNA-binding protein, putative [Musa acuminata] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein 27C, putative 1.007e-15
Putative C-terminus
sp_v3.0_unigene142185 SustainPine v3.0 230
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_001030936.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAT06458.1| At2g01275 [Arabidopsis thaliana] gb|AEC05426.1| RING/FYVE/PHD zinc finger-containing 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Membrane associated ring finger 1,8, putative 4.075e-19
Internal
sp_v3.0_unigene142239 SustainPine v3.0 208
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene142301 SustainPine v3.0 1212
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T2M9_RICCO 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene142312 SustainPine v3.0 1345
• AutoFact: putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methylt 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ankyrin protein kinase-like 3.824e-18
Internal
sp_v3.0_unigene142392 SustainPine v3.0 509
• AutoFact: Unassigned protein 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene142550 SustainPine v3.0 492
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 1.031e-20
Internal
sp_v3.0_unigene142689 SustainPine v3.0 603
• AutoFact: 60S ribosomal protein L7a n=11 Tax=Poaceae RepID=RL7A_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.42e-08
N-terminus
sp_v3.0_unigene142868 SustainPine v3.0 296
• AutoFact: 60S ribosomal protein l7a [Oryza sativa Indica Group] 1.0e-18
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: 60S ribosomal protein L7a, putative 7.149e-09
Internal
sp_v3.0_unigene142873 SustainPine v3.0 230
• AutoFact: Unassigned protein 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene142889 SustainPine v3.0 308
• AutoFact: 60S ribosomal protein l7a [Oryza sativa Indica Group] 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.062e-08
Internal
sp_v3.0_unigene143141 SustainPine v3.0 974
• AutoFact: DUF716 domain containing protein 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene143240 SustainPine v3.0 669
• AutoFact: DUF716 domain containing protein 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene143284 SustainPine v3.0 536
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain