Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene21094 SustainPine v3.0 656
AutoFact: TGF-beta inducible protein (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M300_PLAAC 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene21106 SustainPine v3.0 568
AutoFact: Unassigned protein 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene21386 SustainPine v3.0 1469
AutoFact: DUF716 domain containing protein 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene21538 SustainPine v3.0 1510
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 2.94273e-44
FL-Next: sp=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene21885 SustainPine v3.0 303
AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] gb|ABF99613.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29106.1| hypothetical protein OsJ_13163 [Oryza sativa Japonica Group] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 1.655e-26
Internal
sp_v3.0_unigene22007 SustainPine v3.0 706
AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 6.819e-06
N-terminus
sp_v3.0_unigene22041 SustainPine v3.0 441
AutoFact: putative cytochrome P450 [Lolium rigidum] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cytochrome P450 5.604e-24
Putative C-terminus
sp_v3.0_unigene22096 SustainPine v3.0 744
AutoFact: cleavage and polyadenylation specificity factor subunit 3-II [Arabidopsis thaliana] sp|Q8GUU3.2|CPS3B_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 3-II; AltName: Full=Cleavage and polyadenylation specificity factor 73 kDa su 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-II; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative cleavage and polyadenylation specifity factor 4.876e-09
Internal
sp_v3.0_unigene22206 SustainPine v3.0 427
AutoFact: Unassigned protein 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene22225 SustainPine v3.0 441
AutoFact: Unassigned protein 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene22435 SustainPine v3.0 789
AutoFact: ubiquitin-protein ligase E3-alpha-like protein [Arabidopsis thaliana] 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene22590 SustainPine v3.0 1637
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CHY zinc finger family protein, expressed 3.957e-24
Complete
sp_v3.0_unigene22633 SustainPine v3.0 2732
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] dbj|BAC42504.1| unknown protein [Arabidopsis thaliana] gb|ACN59279.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AEE36273.1| leucine-rich repeat protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinase, putative 4.71e-16
Complete
sp_v3.0_unigene22823 SustainPine v3.0 689
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 2.0e-12
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene22845 SustainPine v3.0 910
AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene22910 SustainPine v3.0 1267
AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene22936 SustainPine v3.0 1181
AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23087 SustainPine v3.0 2704
AutoFact: arabinose kinase [Arabidopsis thaliana] sp|O23461.1|ARAK_ARATH RecName: Full=L-arabinokinase; Short=AtISA1 emb|CAB10392.1| galactokinase like protein [Arabidopsis thaliana] emb|CAB78655.1| galactokinase like protein [Arabidopsis thaliana] gb|AEE83696.1| a 0.0
FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Arabinose kinase-like protein 1.262e-08
C-terminus
sp_v3.0_unigene23347 SustainPine v3.0 1680
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin-protein ligase, putative 3.096e-07
Complete
sp_v3.0_unigene23373 SustainPine v3.0 1208
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974785.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAC01778.1| putative protein [Arabidopsis thaliana] gb|AAM98197.1| unknown protein [Arabidopsis thaliana] gb|AAP13 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain