Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene16452 SustainPine v3.0 1459
• AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] dbj|BAE98370.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30249.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene16806 SustainPine v3.0 2336
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB36_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein binding protein, putative 0.0
Complete
sp_v3.0_unigene16830 SustainPine v3.0 896
• AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein At2g38920 1.443e-08
Putative C-terminus
sp_v3.0_unigene16852 SustainPine v3.0 855
• AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
• FL-Next: Isoform 2 of Protein translocase subunit SECA2, chloroplastic OS=Arabidopsis thaliana GN=SECA2 0.0
• Sma3: Protein translocase subunit secA 1.852e-19
Internal
sp_v3.0_unigene16858 SustainPine v3.0 964
• AutoFact: F27J15.13 n=2 Tax=Arabidopsis thaliana RepID=Q9M9B0_ARATH 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.021e-25
Putative C-terminus
sp_v3.0_unigene16924 SustainPine v3.0 1484
• AutoFact: CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] gb|AED93462.1| CHY and CTCHY and RING-type zinc finger protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CHY zinc finger family protein, expressed 5.378e-24
Complete
sp_v3.0_unigene17132 SustainPine v3.0 1417
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene17159 SustainPine v3.0 750
• AutoFact: Unassigned protein 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene17196 SustainPine v3.0 1482
• AutoFact: 60S ribosomal protein L7a n=11 Tax=Poaceae RepID=RL7A_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.538e-08
Complete
sp_v3.0_unigene17484 SustainPine v3.0 2753
• AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycogen synthase kinase-3 beta, putative 1.759e-16
Complete
sp_v3.0_unigene17528 SustainPine v3.0 1085
• AutoFact: Putative RING zinc finger protein-like protein n=1 Tax=Eutrema halophilum RepID=Q8S2S3_THEHA 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17594 SustainPine v3.0 2453
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T2M9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.202e-09
Complete
sp_v3.0_unigene17596 SustainPine v3.0 1875
• AutoFact: Os01g0883900 protein n=3 Tax=Oryza sativa RepID=Q0JH49_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 9.634e-24
C-terminus
sp_v3.0_unigene17611 SustainPine v3.0 1020
• AutoFact: putative ring-box protein [Oryza sativa Japonica Group] dbj|BAD44884.1| putative ring-box protein [Oryza sativa Japonica Group] gb|EEE53718.1| hypothetical protein OsJ_00057 [Oryza sativa Japonica Group] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 2.48e-16
Complete
sp_v3.0_unigene17762 SustainPine v3.0 1438
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAD10644.1| Unknown protein [Arabidopsis thaliana] gb|AAK62663.1| At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAN18071.1| At1g 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17833 SustainPine v3.0 1868
• AutoFact: E3 ubiquitin-protein ligase DTX3L [Rattus norvegicus] gb|EDM11302.1| similar to deltex 3-like (predicted) [Rattus norvegicus] 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene18183 SustainPine v3.0 2494
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Rnf5, putative 6.494e-15
Complete
sp_v3.0_unigene18189 SustainPine v3.0 572
• AutoFact: putative RNA-binding protein [Arabidopsis thaliana] 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heterogeneous nuclear ribonucleoprotein 27C, putative 1.259e-15
N-terminus
sp_v3.0_unigene18340 SustainPine v3.0 969
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGV0.1|Y5487_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At5g48740; Flags: Precursor gb|ACN59385.1| leucine-rich repeat receptor-like 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 2.791e-37
Putative C-terminus
sp_v3.0_unigene18391 SustainPine v3.0 2238
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain