Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15084 SustainPine v3.0 1106
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_973461.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11603.1|AF424609_1 unknown protein [Arabidopsis thaliana] gb|AAM15000.1| Expressed protein [Arabidopsis thaliana 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene15217 SustainPine v3.0 803
• AutoFact: RING-H2 finger protein ATL1L, putative n=1 Tax=Ricinus communis RepID=B9S872_RICCO 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene15432 SustainPine v3.0 1756
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copine, putative 1.213e-20
Complete
sp_v3.0_unigene15458 SustainPine v3.0 687
• AutoFact: Putative zinc finger protein [Arabidopsis thaliana] 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene15498 SustainPine v3.0 348
• AutoFact: concanavalin A-like lectin kinase-like protein [Arabidopsis thaliana] sp|Q9M345.1|LRK42_ARATH RecName: Full=L-type lectin-domain containing receptor kinase IV.2; Short=Arabidopsis thaliana lectin-receptor kinase a4; Short=AthlecRK-a4; Short=LecRK-IV.2; Al 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative receptor-type protein kinase LRK1 7.098e-27
Internal
sp_v3.0_unigene15619 SustainPine v3.0 1112
• AutoFact: Unassigned protein
• FL-Next: sp=Putative E3 ubiquitin-protein ligase RF298; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene15783 SustainPine v3.0 726
• AutoFact: RING-H2 finger protein ATL66 [Arabidopsis thaliana] sp|Q9SRM0.1|ATL66_ARATH RecName: Full=RING-H2 finger protein ATL66 gb|AAF01530.1|AC009991_26 hypothetical protein [Arabidopsis thaliana] gb|AAG50960.1|AC073395_2 RING zinc finger protein; 17145-17621 [Ar 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene15790 SustainPine v3.0 499
• AutoFact: RING-H2 finger protein ATL72 [Arabidopsis thaliana] sp|Q9SG96.1|ATL72_ARATH RecName: Full=RING-H2 finger protein ATL72 gb|AAF19558.1|AC011708_1 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAO44037.1| At3g10910 [Arabidopsis thaliana] dbj|BA 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene15826 SustainPine v3.0 1643
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene15888 SustainPine v3.0 1133
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF23258.1|AC015985_16 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAF23312.1|AC016661_37 unknown protein [Arabidopsis thaliana] gb|AAL66972.1| putative RING zinc finger protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Mahogunin, putative 3.284e-12
C-terminus
sp_v3.0_unigene15920 SustainPine v3.0 463
• AutoFact: PREDICTED: similar to thioredoxin-related protein isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001983C70 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene16020 SustainPine v3.0 1243
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 5.0e-25
• FL-Next: sp=RING-H2 zinc finger protein RHA1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene16053 SustainPine v3.0 343
unknown
sp_v3.0_unigene16073 SustainPine v3.0 291
• AutoFact: DUF1421 domain containing protein 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene16124 SustainPine v3.0 946
• AutoFact: RING-H2 finger protein ATL78 [Arabidopsis thaliana] sp|Q6NQG7.1|ATL78_ARATH RecName: Full=RING-H2 finger protein ATL78 gb|AAQ65112.1| At1g49230 [Arabidopsis thaliana] dbj|BAD43998.1| putative RING zinc finger protein [Arabidopsis thaliana] dbj|BAD44275.1| 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene16140 SustainPine v3.0 2642
• AutoFact: putative methyltransferase PMT2 [Arabidopsis thaliana] ref|NP_849710.1| putative methyltransferase PMT2 [Arabidopsis thaliana] sp|B9DFI7.2|PMT2_ARATH RecName: Full=Probable methyltransferase PMT2 gb|AAK59830.1| At1g26850/T2P11_4 [Arabidopsis thaliana] gb| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 6.225e-24
Complete
sp_v3.0_unigene16156 SustainPine v3.0 1573
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAD10644.1| Unknown protein [Arabidopsis thaliana] gb|AAK62663.1| At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAN18071.1| At1g 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16240 SustainPine v3.0 807
• AutoFact: Putative methyltransferase domain-containing protein n=4 Tax=Arabidopsis RepID=Q9M144_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATRAD3, putative 2.198e-17
Internal
sp_v3.0_unigene16282 SustainPine v3.0 325
• AutoFact: pfam07714, Pkinase_Tyr, Protein tyrosine kinase 2.0e-08
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene16295 SustainPine v3.0 395
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 1.771e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain