Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13688 SustainPine v3.0 1172
AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13742 SustainPine v3.0 1819
AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peroxisome biogenesis factor 10 4.688e-09
Complete
sp_v3.0_unigene13797 SustainPine v3.0 1155
AutoFact: zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849687.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] ref|NP_849688.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene13815 SustainPine v3.0 2537
AutoFact: putative methyltransferase PMT12 [Arabidopsis thaliana] sp|Q9FG39.1|PMTC_ARATH RecName: Full=Probable methyltransferase PMT12 dbj|BAB10206.1| ankyrin-like protein [Arabidopsis thaliana] gb|AAU05491.1| At5g06050 [Arabidopsis thaliana] gb|AAW80868.1| At5g06 0.0
FL-Next: sp=Probable methyltransferase PMT12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP binding protein, putative 9.476e-24
Complete
sp_v3.0_unigene13870 SustainPine v3.0 1891
AutoFact: E3 ubiquitin protein ligase DRIP2 [Arabidopsis thaliana] sp|Q94AY3.1|DRIP2_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP2; AltName: Full=DREB2A-interacting protein 2 gb|AAK73976.1| At2g30580/T6B20.7 [Arabidopsis thaliana] gb|AAB63079.2| putative C3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ring finger protein, putative 3.638e-06
Complete
sp_v3.0_unigene13961 SustainPine v3.0 436
AutoFact: zinc finger family protein [Picea abies] 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RING-H2 finger protein ATL2M 4.997e-12
Internal
sp_v3.0_unigene14030 SustainPine v3.0 992
AutoFact: pfam12819, Malectin_like, Carbohydrate-binding protein of the ER 3.0e-28
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene14118 SustainPine v3.0 2856
AutoFact: putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methylt 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 7.909e-20
Putative Complete
sp_v3.0_unigene14208 SustainPine v3.0 3164
AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14264 SustainPine v3.0 780
AutoFact: Mandelonitrile lyase n=3 Tax=Zea mays RepID=B6SVJ2_MAIZE 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative N-terminus
sp_v3.0_unigene14281 SustainPine v3.0 1011
AutoFact: receptor protein kinase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 3.55e-19
C-terminus
sp_v3.0_unigene14304 SustainPine v3.0 4542
AutoFact: JmjC multi-domain protein 4.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ENBP1 protein 4.484e-08
Complete
sp_v3.0_unigene14318 SustainPine v3.0 2293
AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Von Willebrand factor type A domain containing protein, expressed 9.722e-07
Complete
sp_v3.0_unigene14356 SustainPine v3.0 962
AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AEE79284.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inter-alpha-trypsin inhibitor heavy chain H3, putative 4.863e-08
Internal
sp_v3.0_unigene14399 SustainPine v3.0 1774
AutoFact: RING-H2 finger protein [Glycine max] 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14400 SustainPine v3.0 661
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42311.1| unknown protein [Arabidopsis thaliana] dbj|BAD95088.1| hypothetical protein [Arabidopsis thaliana] dbj|BAD93876.1| hypothetical protein [Arabidopsis thaliana] gb|AED91256.1| RING/ 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14435 SustainPine v3.0 842
AutoFact: Unassigned protein 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene14485 SustainPine v3.0 2378
AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AAO39425.1| phytochrome and flowering time 1 protein [Arabidopsis thaliana] gb|AEE30639.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene14543 SustainPine v3.0 376
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene14562 SustainPine v3.0 521
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain