Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Zinc finger, C3HC4 RING-type

Term: IPR018957  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene12543 SustainPine v3.0 2123
• AutoFact: RING-H2 finger protein ATL52 [Arabidopsis thaliana] sp|Q9LF64.1|ATL52_ARATH RecName: Full=RING-H2 finger protein ATL52 emb|CAC01904.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] gb|AED92447.1| RING-H2 finger protein ATL52 [Arabidopsis thalian 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12864 SustainPine v3.0 1832
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12870 SustainPine v3.0 2647
• AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AAL66968.1| unknown protein [Arabidopsis thaliana] gb|AAL91189.1| putative protein [Arabidopsis thaliana] gb|AAM20289.1| unknown protein [Arabidopsis thaliana] gb|AEE86087.1| C3H4 type zinc finger pr 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene12971 SustainPine v3.0 2409
• AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr7 scaffold_20, whole genome shotgun sequence 9.413e-07
Complete
sp_v3.0_unigene13009 SustainPine v3.0 1501
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zinc finger protein, putative 4.554e-08
Putative Complete
sp_v3.0_unigene13065 SustainPine v3.0 2381
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Brca1-associated protein, putative 8.35e-09
Complete
sp_v3.0_unigene13088 SustainPine v3.0 1185
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 5.962e-27
Internal
sp_v3.0_unigene13130 SustainPine v3.0 3161
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13169 SustainPine v3.0 1761
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene13188 SustainPine v3.0 1855
• AutoFact: DUF248 multi-domain protein 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATRAD3, putative 1.934e-08
Complete
sp_v3.0_unigene13316 SustainPine v3.0 723
• AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AEE79285.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inter-alpha-trypsin inhibitor heavy chain H3, putative 4.09e-10
Internal
sp_v3.0_unigene13339 SustainPine v3.0 918
• AutoFact: E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana] sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName: Full=RING-H2 finger protein ATL42; Flags: Precursor emb|CAB43903.1| putative protein [Arabidopsis thaliana] emb|CAB8 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene13383 SustainPine v3.0 1728
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: sp=Putative E3 ubiquitin-protein ligase XBAT34; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene13426 SustainPine v3.0 639
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 5.022e-29
Internal
sp_v3.0_unigene13483 SustainPine v3.0 703
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene13514 SustainPine v3.0 1668
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein binding protein, putative 4.946e-11
N-terminus
sp_v3.0_unigene13550 SustainPine v3.0 1034
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 1.59e-07
C-terminus
sp_v3.0_unigene13584 SustainPine v3.0 831
• AutoFact: Unassigned protein
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene13586 SustainPine v3.0 557
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR20753.1| At1g68180 [Arabidopsis thaliana] gb|AAX22268.1| At1g68180 [Arabidopsis thaliana] gb|AAZ14055.1| At1g68180 [Arabidopsis thaliana] gb|AEE34760.1| RING/U-box domain-containing protein 7.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene13677 SustainPine v3.0 957
• AutoFact: ATP binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T9S4_RICCO 0.0
• FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Kinase, putative 1.496e-06
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain