Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reticulon

Term: IPR003388  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene318 SustainPine v3.0 2792
AutoFact: Nucleotid_trans domain containing protein 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycosyltransferase family 77 protein 5.705e-08
Putative Complete
sp_v3.0_unigene829 SustainPine v3.0 2641
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AAF79453.1|AC025808_35 F18O14.8 [Arabidopsis thaliana] gb|AAM65662.1| unknown [Arabidopsis thaliana] gb|ABG25079.1| At1g19360 [Arabidopsis thaliana] dbj|BAF00917.1| hypothetic 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1065 SustainPine v3.0 1212
AutoFact: pfam02453, Reticulon, Reticulon 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Reticulon 9.276e-09
Putative Complete
sp_v3.0_unigene2839 SustainPine v3.0 1536
AutoFact: putative hydroxyacylglutathione hydrolase 2, chloroplast [Arabidopsis thaliana] gb|AAM20436.1| glyoxalase II isozyme, putative [Arabidopsis thaliana] gb|AAM91233.1| glyoxalase II isozyme, putative [Arabidopsis thaliana] gb|AEE27943.1| putative hydroxyacyl 0.0
FL-Next: Isoform 2 of Probable hydroxyacylglutathione hydrolase 2, chloroplast OS=Arabidopsis thaliana GN=GLX2-4 0.0
Sma3: Glyoxalase II 1.395e-14
Complete
sp_v3.0_unigene3285 SustainPine v3.0 1720
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6856 SustainPine v3.0 2595
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7605 SustainPine v3.0 1350
AutoFact: rhamnogalacturonan II specific xylosyltransferase [Arabidopsis thaliana] emb|CAB80931.1| hypothetical protein [Arabidopsis thaliana] gb|ACF28391.1| At4g01220 [Arabidopsis thaliana] gb|AEE81995.1| rhamnogalacturonan II specific xylosyltransferase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene7625 SustainPine v3.0 2134
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 0.0
FL-Next: sp=Reticulon-like protein B21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_689, whole genome shotgun sequence 5.848e-06
Complete
sp_v3.0_unigene7647 SustainPine v3.0 2418
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 0.0
FL-Next: sp=Reticulon-like protein B21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative Complete
sp_v3.0_unigene8388 SustainPine v3.0 1489
AutoFact: reticulon-like protein B16 [Arabidopsis thaliana] sp|Q8GYH6.1|RTNLP_ARATH RecName: Full=Reticulon-like protein B16; Short=AtRTNLB16 dbj|BAC42275.1| unknown protein [Arabidopsis thaliana] gb|AAO50641.1| unknown protein [Arabidopsis thaliana] gb|AEE74972.1| 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed maturation protein 1.197e-12
Complete
sp_v3.0_unigene9135 SustainPine v3.0 1312
AutoFact: reticulon-like protein B22 [Arabidopsis thaliana] sp|Q8GWH5.1|RTNLT_ARATH RecName: Full=Reticulon-like protein B22; Short=AtRTNLB22 dbj|BAC43428.1| unknown protein [Arabidopsis thaliana] gb|AAO63877.1| unknown protein [Arabidopsis thaliana] gb|AEE36170.1| 8.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10275 SustainPine v3.0 1511
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glyoxalase II 1.96e-11
Putative Complete
sp_v3.0_unigene13673 SustainPine v3.0 902
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AEE35092.1| Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene15766 SustainPine v3.0 1008
AutoFact: reticulon-like protein B12 [Arabidopsis thaliana] sp|Q9M392.1|RTNLL_ARATH RecName: Full=Reticulon-like protein B12; Short=AtRTNLB12 emb|CAB70986.1| putative protein [Arabidopsis thaliana] gb|AAR20755.1| At3g54120 [Arabidopsis thaliana] gb|AAR24756.1| At3g 3.0e-28
FL-Next: sp=Reticulon-like protein B12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Reticulon 2.744e-08
Complete
sp_v3.0_unigene16714 SustainPine v3.0 806
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-beta-hydroxysteroid dehydrogenase 7.95e-12
Internal
sp_v3.0_unigene18444 SustainPine v3.0 1462
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21126 SustainPine v3.0 735
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene22568 SustainPine v3.0 1155
AutoFact: reticulon-like protein B5 [Arabidopsis thaliana] sp|O82352.1|RTNLE_ARATH RecName: Full=Reticulon-like protein B5; Short=AtRTNLB5 gb|AAC62889.1| expressed protein [Arabidopsis thaliana] gb|AAK96651.1| At2g46170/T3F17.18 [Arabidopsis thaliana] gb|AAL69534.1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene22778 SustainPine v3.0 1553
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene27641 SustainPine v3.0 1809
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed maturation protein 5.186e-24
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain