Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Reticulon

Term: IPR003388  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene101430 SustainPine v3.0 658
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene104868 SustainPine v3.0 358
AutoFact: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Zea mays RepID=B6TKP9_MAIZE 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 3-beta hydroxysteroid dehydrogenase/isomerase 5.344e-12
Putative N-terminus
sp_v3.0_unigene109237 SustainPine v3.0 436
AutoFact: reticulon-like protein B3 [Arabidopsis thaliana] sp|Q9SH59.1|RTNLC_ARATH RecName: Full=Reticulon-like protein B3; Short=AtRTNLB3 gb|AAF24576.1|AC007764_18 F22C12.15 [Arabidopsis thaliana] gb|AAL36421.1| unknown protein [Arabidopsis thaliana] gb|AAM51418.1 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene119255 SustainPine v3.0 212
AutoFact: 3-beta-hydroxysteroid dehydrogenase-like [Oryza sativa Japonica Group] dbj|BAD33824.1| 3-beta-hydroxysteroid dehydrogenase-like [Oryza sativa Japonica Group] 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene126492 SustainPine v3.0 760
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene127971 SustainPine v3.0 1005
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed maturation protein 1.985e-21
C-terminus
sp_v3.0_unigene128090 SustainPine v3.0 519
AutoFact: Unassigned protein 9.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene129013 SustainPine v3.0 298
AutoFact: Ataxin-3 like protein [Arabidopsis thaliana] sp|Q9M391.1|ATX3H_ARATH RecName: Full=Ataxin-3 homolog; AltName: Full=MJD1a-like; AltName: Full=Machado-Joseph disease-like protein emb|CAB70987.1| Machado-Joseph disease MJD1a-like protein [Arabidopsis thalian 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130705 SustainPine v3.0 253
AutoFact: Reticulon domain containing protein 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed maturation protein 3.745e-18
Internal
sp_v3.0_unigene136051 SustainPine v3.0 311
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143309 SustainPine v3.0 494
AutoFact: reticulon-like protein B2 [Arabidopsis thaliana] sp|Q9SUT9.1|RTNLB_ARATH RecName: Full=Reticulon-like protein B2; Short=AtRTNLB2; AltName: Full=VirB2-interacting protein 2 emb|CAB51406.1| putative protein [Arabidopsis thaliana] emb|CAB81223.1| putative pr 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 24 kDa seed maturation protein 2.039e-09
C-terminus
sp_v3.0_unigene144508 SustainPine v3.0 1025
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Misassembled
sp_v3.0_unigene145006 SustainPine v3.0 505
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLV6_ELAGV 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed maturation protein 5.137e-16
Internal
sp_v3.0_unigene145348 SustainPine v3.0 340
AutoFact: reticulon-like protein B4 [Arabidopsis thaliana] sp|Q9FFS0.1|RTNLD_ARATH RecName: Full=Reticulon-like protein B4; Short=AtRTNLB4; AltName: Full=VirB2-interacting protein 3 dbj|BAB11466.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59673.1| unkno 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene145378 SustainPine v3.0 620
AutoFact: reticulon-like protein B1 [Arabidopsis thaliana] sp|Q9SUR3.1|RTNLA_ARATH RecName: Full=Reticulon-like protein B1; Short=AtRTNLB1; AltName: Full=VirB2-interacting protein 1 emb|CAA23029.1| putative protein [Arabidopsis thaliana] emb|CAB79318.1| putative pr 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed maturation protein 2.18e-11
N-terminus
sp_v3.0_unigene148116 SustainPine v3.0 250
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene160128 SustainPine v3.0 399
AutoFact: Hydroxyacylglutathione hydrolase n=1 Tax=Agrobacterium vitis S4 RepID=B9JTK8_AGRVS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene163676 SustainPine v3.0 405
AutoFact: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Zea mays RepID=B6TKP9_MAIZE 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 3-beta hydroxysteroid dehydrogenase/isomerase 7.7e-14
N-terminus
sp_v3.0_unigene163825 SustainPine v3.0 292
AutoFact: reticulon-like protein B4 [Arabidopsis thaliana] sp|Q9FFS0.1|RTNLD_ARATH RecName: Full=Reticulon-like protein B4; Short=AtRTNLB4; AltName: Full=VirB2-interacting protein 3 dbj|BAB11466.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59673.1| unkno 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene165676 SustainPine v3.0 417
AutoFact: reticulon-like protein B22 [Arabidopsis thaliana] sp|Q8GWH5.1|RTNLT_ARATH RecName: Full=Reticulon-like protein B22; Short=AtRTNLB22 dbj|BAC43428.1| unknown protein [Arabidopsis thaliana] gb|AAO63877.1| unknown protein [Arabidopsis thaliana] gb|AEE36170.1| 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain