Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, DEAD-box type, Q motif

Term: IPR014014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene152282 SustainPine v3.0 420
• AutoFact: DEAD box helicase n=1 Tax=Ectocarpus siliculosus RepID=D8LJE9_ECTSI 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.009e-10
C-terminus
sp_v3.0_unigene152906 SustainPine v3.0 413
• AutoFact: Putative DEAD/DEAH box helicase n=1 Tax=Trichinella spiralis RepID=E5SYL4_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 21 1.116e-07
C-terminus
sp_v3.0_unigene153490 SustainPine v3.0 370
• AutoFact: ATP-dependent RNA helicase, putative n=2 Tax=Trichocomaceae RepID=B8MG36_TALSN 6.0e-37
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 51; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene153528 SustainPine v3.0 499
• AutoFact: DEAD-box ATP-dependent RNA helicase 49 [Arabidopsis thaliana] sp|Q8GXD6.2|RH49_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 49 gb|AAG51820.1|AC016163_9 putative ATP-dependent RNA helicase; 76692-78838 [Arabidopsis thaliana] gb|AEE35194.1| DEAD- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 18 8.71e-09
Internal
sp_v3.0_unigene154254 SustainPine v3.0 281
• AutoFact: DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FH88_FLAJ1 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.818e-11
Internal
sp_v3.0_unigene154437 SustainPine v3.0 508
• AutoFact: DEAD box ATP-dependent RNA helicase n=1 Tax=Culex quinquefasciatus RepID=B0XJH6_CULQU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.058e-11
C-terminus
sp_v3.0_unigene154848 SustainPine v3.0 297
• AutoFact: HLA-B associated transcript 1 [Homo sapiens] emb|CAM25876.1| HLA-B associated transcript 1 [Homo sapiens] emb|CAO72085.1| HLA-B associated transcript 1 [Homo sapiens] emb|CAQ06507.1| HLA-B associated transcript 1 [Homo sapiens] emb|CAQ09976.1| HLA-B assoc 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 56 5.097e-09
Internal
sp_v3.0_unigene155009 SustainPine v3.0 406
• AutoFact: Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family n=2 Tax=Pichia pastoris RepID=C4QV56_PICPG 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene155381 SustainPine v3.0 359
• AutoFact: Dead box family RNA helicase n=1 Tax=Thalassiosira pseudonana RepID=B8LBP2_THAPS 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155574 SustainPine v3.0 341
• AutoFact: PREDICTED: eukaryotic translation initiation factor 4A-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC21A 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.736e-11
C-terminus
sp_v3.0_unigene155759 SustainPine v3.0 322
• AutoFact: N-terminal acetyltransferase ARD1 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C294_9EUKA 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Silencing group B protein 1.508e-11
Putative N-terminus
sp_v3.0_unigene155802 SustainPine v3.0 456
• AutoFact: ATP-dependent RNA helicase DBP3 n=1 Tax=Gibberella zeae PH-1 RepID=DBP3_GIBZE 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 5 2.364e-08
C-terminus
sp_v3.0_unigene156104 SustainPine v3.0 604
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.316e-09
C-terminus
sp_v3.0_unigene156238 SustainPine v3.0 537
• AutoFact: N-alpha-acetyltransferase 10, NatA catalytic subunit n=10 Tax=Eutheria RepID=NAA10_MOUSE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Silencing group B protein 1.628e-11
C-terminus
sp_v3.0_unigene156321 SustainPine v3.0 329
• AutoFact: ATP-dependent RNA helicase n=1 Tax=Dictyostelium fasciculatum RepID=F4Q0Y8_9MYCE 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene156459 SustainPine v3.0 486
• AutoFact: DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana] gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana] 6.0e-21
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene156539 SustainPine v3.0 524
• AutoFact: Proteasome subunit alpha type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGK9_9EUKA 0.0
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.775e-25
Putative C-terminus
sp_v3.0_unigene156979 SustainPine v3.0 539
• AutoFact: Proteasome subunit alpha type n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CGK9_9EUKA 1.4013e-45
• FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasome subunit alpha type 1.775e-25
C-terminus
sp_v3.0_unigene157425 SustainPine v3.0 448
• AutoFact: eukaryotic initiation factor 4A-III [Danio rerio] sp|Q7ZVA6.1|IF4A3_DANRE RecName: Full=Eukaryotic initiation factor 4A-III; Short=eIF-4A-III; Short=eIF4A-III; AltName: Full=ATP-dependent RNA helicase DDX48; AltName: Full=ATP-dependent RNA helicase eIF4A- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.053e-09
C-terminus
sp_v3.0_unigene157633 SustainPine v3.0 253
• AutoFact: putative eukaryotic translation initiation factor 4A [Maconellicoccus hirsutus] 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain