Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA/RNA helicase, DEAD/DEAH box type, N-terminal

Term: IPR011545  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene193311 SustainPine v3.0 607
AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Chara globularis RepID=Q5KU23_CHAGO 9.80909e-45
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene196487 SustainPine v3.0 198
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 2.0e-16
FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 0.0
Internal
sp_v3.0_unigene199229 SustainPine v3.0 549
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 5.04467e-44
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.971e-19
Internal
sp_v3.0_unigene199742 SustainPine v3.0 380
AutoFact: DEAD/DEAH box helicase n=1 Tax=Dictyostelium fasciculatum RepID=F4QDX4_9MYCE 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene199877 SustainPine v3.0 815
AutoFact: PREDICTED: alternative splicing factor SRp20/9G8, putative-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBF9B 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene200329 SustainPine v3.0 495
AutoFact: Proteasome subunit alpha type n=2 Tax=Onchocercidae RepID=E1FL02_LOALO 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 4.05e-28
Internal
sp_v3.0_unigene204472 SustainPine v3.0 572
AutoFact: ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL55992.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 27 1.176e-08
Putative N-terminus
sp_v3.0_unigene204483 SustainPine v3.0 179
AutoFact: ATP-dependent RNA helicase-like protein [Oryza sativa Japonica Group] dbj|BAD32021.1| ATP-dependent RNA helicase-like protein [Oryza sativa Japonica Group] 2.0e-09
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene205666 SustainPine v3.0 431
AutoFact: GRP multi-domain protein 3.0e-14
Sma3: Putative glycine rich protein 1.101e-24
coding
sp_v3.0_unigene205765 SustainPine v3.0 877
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene207787 SustainPine v3.0 549
AutoFact: Putative DEAD-box protein abstrakt n=1 Tax=Trifolium pratense RepID=Q2PEY4_TRIPR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 9.916e-12
Internal
sp_v3.0_unigene207829 SustainPine v3.0 474
AutoFact: peptide alpha-N-acetyltransferase [Arabidopsis thaliana] dbj|BAB10599.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96745.1| Unknown protein [Arabidopsis thaliana] gb|AAL47392.1| unknown protein [Arabidopsis thaliana] gb|AAM64579.1| silencing gr 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Silencing group B protein 1.508e-11
N-terminus
sp_v3.0_unigene208323 SustainPine v3.0 437
AutoFact: GRP multi-domain protein 4.0e-12
Sma3: Putative glycine-rich cell wall structural protein 7.164e-11
coding
sp_v3.0_unigene208721 SustainPine v3.0 237
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 13 dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana] 2.0e-17
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 13; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 13 8.543e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain