Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene148818 SustainPine v3.0 174
• AutoFact: mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] emb|CAL52650.1| mRNA splicing factor ATP-dependent RNA helicase (ISS) [Ostreococcus tauri] 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene148935 SustainPine v3.0 301
• AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-10
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene149022 SustainPine v3.0 246
• AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 8.0e-30
• FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative transcriptional regulator 3.249e-08
Internal
sp_v3.0_unigene149055 SustainPine v3.0 289
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149203 SustainPine v3.0 153
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene149220 SustainPine v3.0 292
• AutoFact: DEAD-box ATP-dependent RNA helicase 52 [Arabidopsis thaliana] sp|Q9M2F9.1|RH52_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 52 emb|CAB68195.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAK83627.1| AT3g58570/F14P22_160 [A 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 4.546e-08
Internal
sp_v3.0_unigene149236 SustainPine v3.0 299
• AutoFact: Polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3X6_SOLDE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene149497 SustainPine v3.0 126
• AutoFact: U520, putative n=2 Tax=rosids RepID=B9RY79_RICCO 3.0e-17
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene149511 SustainPine v3.0 215
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 7.0e-23
• FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149518 SustainPine v3.0 208
• AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 1.0e-13
• FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149521 SustainPine v3.0 112
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene149558 SustainPine v3.0 192
• AutoFact: DEAD-box ATP-dependent RNA helicase 39 n=3 Tax=Oryza sativa RepID=RH39_ORYSJ 5.0e-13
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 39; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 39 2.399e-09
Internal
sp_v3.0_unigene149755 SustainPine v3.0 174
• AutoFact: ATP-dependent RNA helicase eIF4A n=2 Tax=Ustilaginaceae RepID=IF4A_USTMA 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 2 2.486e-08
Internal
sp_v3.0_unigene149800 SustainPine v3.0 362
• AutoFact: RNA helicase, DRH1 [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 14 4.022e-08
Putative C-terminus
sp_v3.0_unigene150227 SustainPine v3.0 471
• AutoFact: Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative n=1 Tax=Toxoplasma gondii RepID=B9PQP0_TOXGO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 2-oxoglutarate dehydrogenase E2 subunit 1.362e-08
C-terminus
sp_v3.0_unigene150391 SustainPine v3.0 357
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.384e-09
C-terminus
sp_v3.0_unigene150397 SustainPine v3.0 198
• AutoFact: ATP-dependent RNA helicase DBP3 n=1 Tax=Phaeosphaeria nodorum SN15 RepID=DBP3_PHANO 3.0e-05
• FL-Next: tr=DEAD-domain-containing protein; Coccomyxa subellipsoidea C-169. 0.0
Internal
sp_v3.0_unigene150543 SustainPine v3.0 298
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Cyanidium caldarium RepID=Q9M634_CYACA 3.0e-29
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
Internal
sp_v3.0_unigene150725 SustainPine v3.0 263
• AutoFact: Adenylate kinase 2 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U5L3_9EUKA 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150819 SustainPine v3.0 425
• AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Chlorella variabilis RepID=E1ZQQ5_9CHLO 6.0e-17
• FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain