Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene124543 SustainPine v3.0 167
AutoFact: Defective in RNA-directed DNA methylation 1 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L1V4_ARALL 7.0e-12
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene124774 SustainPine v3.0 167
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 3.858e-09
Internal
sp_v3.0_unigene125218 SustainPine v3.0 274
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 3.0e-36
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.332e-09
Internal
sp_v3.0_unigene125357 SustainPine v3.0 376
AutoFact: DNA Helicase [Arabidopsis thaliana] 8.0e-14
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene125721 SustainPine v3.0 201
AutoFact: ATP-dependent DNA helicase Q-like 1 n=1 Tax=Arabidopsis thaliana RepID=RQL1_ARATH 4.0e-19
FL-Next: sp=ATP-dependent DNA helicase Q-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene125753 SustainPine v3.0 396
AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 1.0e-27
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.412e-06
Internal
sp_v3.0_unigene125952 SustainPine v3.0 237
AutoFact: DEAD-box ATP-dependent RNA helicase 22 n=3 Tax=Oryza sativa RepID=RH22_ORYSJ 1.0e-18
FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 22 1.736e-09
Internal
sp_v3.0_unigene126087 SustainPine v3.0 867
AutoFact: ATP-dependent RNA helicase like protein [Arabidopsis thaliana] emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 1 6.363e-09
Putative C-terminus
sp_v3.0_unigene126442 SustainPine v3.0 199
AutoFact: putative chromatin complex subunit A101 [Oryza sativa Japonica Group] 1.0e-15
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWI2/SNF2-like protein 1.041e-12
Internal
sp_v3.0_unigene126726 SustainPine v3.0 1168
AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Putative Complete
sp_v3.0_unigene126853 SustainPine v3.0 525
AutoFact: 5,10-methylenetetrahydrofolate dehydrogenase-5,10-methenyltetrahydrofolate cyclohydrolase [Pisum sativum] emb|CAB56756.1| 5,10-methylenetetrahydrofolate dehydrogenase: 5,10-methenyltetrahydrofolate cyclohydrolase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetrahydrofolate dehydrogenase/cyclohydrolase 6.503e-12
Putative N-terminus
sp_v3.0_unigene126873 SustainPine v3.0 723
AutoFact: translocon-associated protein subunit beta [Arabidopsis thaliana] ref|NP_001119221.1| translocon-associated protein subunit beta [Arabidopsis thaliana] ref|NP_001119222.1| translocon-associated protein subunit beta [Arabidopsis thaliana] ref|NP_001119223. 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translocon-associated protein beta containing protein 1.696e-09
Complete
sp_v3.0_unigene127176 SustainPine v3.0 570
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 30 6.609e-08
Putative C-terminus
sp_v3.0_unigene127273 SustainPine v3.0 655
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.829e-08
C-terminus
sp_v3.0_unigene127278 SustainPine v3.0 90
AutoFact: Atrophin-1 multi-domain protein 7.0e-08
unknown
sp_v3.0_unigene127327 SustainPine v3.0 1193
AutoFact: Fructose-bisphosphate aldolase n=3 Tax=Picea sitchensis RepID=A9NUH5_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Complete
sp_v3.0_unigene127397 SustainPine v3.0 1308
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Complete
sp_v3.0_unigene127474 SustainPine v3.0 616
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus
sp_v3.0_unigene127586 SustainPine v3.0 846
AutoFact: Fructose-bisphosphate aldolase n=1 Tax=Picea sitchensis RepID=A9NMQ0_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
Putative Complete
sp_v3.0_unigene127850 SustainPine v3.0 829
AutoFact: Fructose-bisphosphate aldolase n=2 Tax=Picea sitchensis RepID=A9NUC9_PICSI 0.0
FL-Next: sp=Fructose-bisphosphate aldolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fructose-bisphosphate aldolase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain