Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene119246 SustainPine v3.0 114
AutoFact: protein dicer-like 2 [Arabidopsis thaliana] ref|NP_001189798.1| protein dicer-like 2 [Arabidopsis thaliana] sp|Q3EBC8.2|DCL2_ARATH RecName: Full=Endoribonuclease Dicer homolog 2; AltName: Full=Dicer-like protein 2; Short=AtDCL2 gb|AEE73924.1| protein dice 5.0e-08
FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana GN=At3g03300 0.0
Sma3: Dicer-like protein 1.312e-13
Internal
sp_v3.0_unigene119545 SustainPine v3.0 146
AutoFact: Chromatin remodeling factor18 n=2 Tax=Arabidopsis RepID=F4HWU9_ARATH 1.0e-12
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119791 SustainPine v3.0 223
AutoFact: HUA enhancer 2 [Arabidopsis thaliana] 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 2.108e-06
Internal
sp_v3.0_unigene119909 SustainPine v3.0 325
AutoFact: Streptomyces cyclase/dehydrase family protein [Brassica oleracea] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT-rich element binding factor 3 3.593e-16
Internal
sp_v3.0_unigene120094 SustainPine v3.0 359
AutoFact: DUF1777 multi-domain protein 2.0e-15
coding
sp_v3.0_unigene120981 SustainPine v3.0 369
AutoFact: DNA Helicase [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA helicase isolog 1.083e-08
Internal
sp_v3.0_unigene121372 SustainPine v3.0 233
AutoFact: RNA helicase n=4 Tax=Arabidopsis RepID=Q9FNQ1_ARATH 5.0e-16
FL-Next: tr=Uncharacterized protein; Oryza glaberrima (African rice). 0.0
Internal
sp_v3.0_unigene121439 SustainPine v3.0 269
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 1.0e-18
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene121512 SustainPine v3.0 172
AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] 8.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene121536 SustainPine v3.0 480
AutoFact: [L] COG4581 Superfamily II RNA helicase 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene121930 SustainPine v3.0 350
AutoFact: DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184938.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] ref|NP_001184939.1| DEAD-like helicase domain-containing protein [Arabidopsis thaliana] gb|AEE28314 3.0e-37
FL-Next: sp=DNA repair and recombination protein RAD54; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene122547 SustainPine v3.0 351
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 3.0e-34
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Dicer-like protein 7.796e-10
Internal
sp_v3.0_unigene122607 SustainPine v3.0 241
AutoFact: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gb|AAD32878.1|AC005489_16 F14N23.16 [Arabidopsis thaliana] gb|ABK32109.1| At1g10280 [Arabidopsis thaliana] gb|AEE28561.1| Core-2/I-branching beta-1,6-N-acety 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene122674 SustainPine v3.0 472
AutoFact: Chromatin remodeling 38 n=5 Tax=Camelineae RepID=Q9M297_ARATH 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene122743 SustainPine v3.0 534
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene123074 SustainPine v3.0 421
AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 4; Short=OsC3H4 dbj|BAE95808.1| ATP-dependent RNA helicase A -like [Oryza sativa Japonica Group] 4.0e-33
FL-Next: sp=Zinc finger CCCH domain-containing protein 4; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene123250 SustainPine v3.0 352
AutoFact: putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) [Oryza sativa Japonica Group] 1.0e-26
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123816 SustainPine v3.0 399
AutoFact: putative ATP-dependent DNA helicase RECG [Arabidopsis thaliana] 8.0e-28
FL-Next: tr=RecG; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene123985 SustainPine v3.0 226
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO 3.0e-22
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 50 3.449e-09
Internal
sp_v3.0_unigene124070 SustainPine v3.0 236
AutoFact: MRNA splicing factor ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01DF3_OSTTA 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain