Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, C-terminal

Term: IPR001650  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene48118 SustainPine v3.0 334
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase rad5,16, putative 5.61e-14
Internal
sp_v3.0_unigene48553 SustainPine v3.0 388
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene48678 SustainPine v3.0 200
AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 1.0e-11
FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene49149 SustainPine v3.0 192
AutoFact: DNA polymerase theta, putative n=1 Tax=Ricinus communis RepID=B9RS63_RICCO 2.0e-17
FL-Next: tr=DNA polymerase theta, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene49220 SustainPine v3.0 334
AutoFact: Putative DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 8 (RNA helicase) n=2 Tax=Oryza sativa RepID=Q7XI36_ORYSJ 2.0e-20
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene49449 SustainPine v3.0 995
AutoFact: Chromatin remodelling complex ATPase chain isw-1, putative n=1 Tax=Ricinus communis RepID=B9S022_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene49757 SustainPine v3.0 584
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 2.114e-07
Internal
sp_v3.0_unigene49780 SustainPine v3.0 451
AutoFact: Helicase, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C873_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.349e-12
Internal
sp_v3.0_unigene49842 SustainPine v3.0 918
AutoFact: [R] COG1204 Superfamily II helicase 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene49894 SustainPine v3.0 393
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 4.0e-26
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 1 4.849e-09
Putative N-terminus
sp_v3.0_unigene50099 SustainPine v3.0 721
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene50171 SustainPine v3.0 301
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HJV0_POPTR 4.0e-23
FL-Next: tr=Chromatin remodeling complex subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Chromatin remodeling complex subunit 2.045e-06
Internal
sp_v3.0_unigene50443 SustainPine v3.0 188
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 9.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene50467 SustainPine v3.0 284
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene50584 SustainPine v3.0 308
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 8.0e-19
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene50593 SustainPine v3.0 141
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-11
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene50616 SustainPine v3.0 231
AutoFact: helicase, putative [Arabidopsis thaliana] 2.0e-25
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene50829 SustainPine v3.0 214
AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helicase, putative 4.12e-09
Internal
sp_v3.0_unigene50893 SustainPine v3.0 181
AutoFact: dicer-like protein [Oryza sativa Indica Group] 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dicer-like protein 4.387e-16
Internal
sp_v3.0_unigene50948 SustainPine v3.0 193
AutoFact: DNA polymerase theta subunit [Arabidopsis thaliana] dbj|BAD93700.1| helicase and polymerase containing protein TEBICHI [Arabidopsis thaliana] gb|AEE86105.1| DNA polymerase theta subunit [Arabidopsis thaliana] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain