Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, superfamily 1/2, ATP-binding domain

Term: IPR014001  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene167050 SustainPine v3.0 142
AutoFact: putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] dbj|BAD19277.1| putative DEAD box-like RNA helicase [Oryza sativa Japonica Group] 1.0e-05
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene167341 SustainPine v3.0 197
AutoFact: Chromatin-remodeling factor CHD3 n=5 Tax=Oryza sativa RepID=Q5SML0_ORYSJ 2.0e-06
FL-Next: tr=Chromatin-remodeling factor CHD3; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene167491 SustainPine v3.0 122
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SBN6_RICCO 3.0e-09
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 1.463e-09
Internal
sp_v3.0_unigene167549 SustainPine v3.0 261
AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 2.99878e-43
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 6.505e-09
Internal
sp_v3.0_unigene168155 SustainPine v3.0 180
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HYI3_POPTR 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168170 SustainPine v3.0 132
AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DsRNA-specific nuclease dicer and related ribonuclease 5.614e-08
Internal
sp_v3.0_unigene168220 SustainPine v3.0 82
AutoFact: Sec63 domain containing protein 7.0e-07
FL-Next: tr=Putative uncharacterized protein Sb04g000670; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene168302 SustainPine v3.0 164
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 8.0e-12
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 1.829e-06
Internal
sp_v3.0_unigene169019 SustainPine v3.0 271
AutoFact: Gly_rich multi-domain protein 7.0e-17
Sma3: Glycine-rich RNA-binding protein 2.56e-14
coding
sp_v3.0_unigene169684 SustainPine v3.0 327
AutoFact: GRP multi-domain protein 3.0e-16
Sma3: Glycine-rich protein 2.897e-16
coding
sp_v3.0_unigene170028 SustainPine v3.0 603
AutoFact: Tymo_45kd_70kd multi-domain protein 5.0e-05
coding
sp_v3.0_unigene170036 SustainPine v3.0 237
AutoFact: GRP multi-domain protein 1.0e-10
Sma3: Putative glycine-rich protein 2.016e-08
coding
sp_v3.0_unigene170514 SustainPine v3.0 434
AutoFact: Drf_FH1 multi-domain protein 2.0e-10
coding
sp_v3.0_unigene171148 SustainPine v3.0 336
AutoFact: GRP multi-domain protein 9.0e-09
coding
sp_v3.0_unigene171386 SustainPine v3.0 283
AutoFact: Herpes_gp2 multi-domain protein 2.0e-14
Sma3: Glycine-rich protein 9.342e-12
coding
sp_v3.0_unigene171933 SustainPine v3.0 418
AutoFact: DUF1777 multi-domain protein 7.0e-10
Sma3: ATP-dependent RNA helicase DDX23 2.447e-09
coding
sp_v3.0_unigene172075 SustainPine v3.0 216
AutoFact: TT_ORF1 multi-domain protein 3.0e-10
coding
sp_v3.0_unigene174162 SustainPine v3.0 217
AutoFact: FAP multi-domain protein 4.0e-09
Sma3: Glycine-rich protein 7.343e-09
coding
sp_v3.0_unigene181973 SustainPine v3.0 313
putative_coding
sp_v3.0_unigene182866 SustainPine v3.0 941
AutoFact: GRP domain containing protein 1.0e-05
Sma3: DEAD-box ATP-dependent RNA helicase 37 2.985e-08
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain