Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Helicase, superfamily 1/2, ATP-binding domain

Term: IPR014001  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene45118 SustainPine v3.0 172
AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 7.0e-18
FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene45176 SustainPine v3.0 224
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene45238 SustainPine v3.0 197
AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 7.358e-06
Internal
sp_v3.0_unigene45269 SustainPine v3.0 178
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0001
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene45558 SustainPine v3.0 154
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene45677 SustainPine v3.0 170
AutoFact: putative helicase [Oryza sativa Japonica Group] 9.0e-24
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.937e-09
Internal
sp_v3.0_unigene46075 SustainPine v3.0 1145
AutoFact: Methylenetetrahydrofolate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9T0V4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetrahydrofolate dehydrogenase/cyclohydrolase 8.213e-12
Complete
sp_v3.0_unigene46112 SustainPine v3.0 795
AutoFact: DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana] sp|Q9LU46.1|RH35_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 35 dbj|BAA97391.1| DEAD-box protein abstrakt [Arabidopsis thaliana] dbj|BAE98527.1| DEAD-box protein abstrakt [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 1.135e-19
C-terminus
sp_v3.0_unigene46130 SustainPine v3.0 561
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 3.709e-32
Internal
sp_v3.0_unigene46180 SustainPine v3.0 945
AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene46268 SustainPine v3.0 1272
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene46300 SustainPine v3.0 402
AutoFact: putative ATP-dependent DNA helicase RecQ [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene46302 SustainPine v3.0 439
AutoFact: DREB [Glycine max] 9.0e-18
FL-Next: tr=DREB protein; Taxus cuspidata (Japanese yew). 0.0
Sma3: Dehydration responsive element binding protein 3.004e-21
N-terminus
sp_v3.0_unigene46471 SustainPine v3.0 282
AutoFact: DEAD/DEAH box helicase [Dictyostelium discoideum AX4] sp|Q54MH3.1|DHX16_DICDI RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; AltName: Full=DEAH-box protein 16 gb|EAL64503.1| DEAD/DEAH box helicase [Dictyostelium discoide 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.925e-21
N-terminus
sp_v3.0_unigene47270 SustainPine v3.0 143
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 7.0e-07
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.304e-14
Internal
sp_v3.0_unigene47294 SustainPine v3.0 403
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box protein At3g54460 emb|CAB77566.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM13867.1| unknown protein [Arabidopsis thaliana] gb|AAO42330.1| unknown protein [Arabid 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene47331 SustainPine v3.0 332
AutoFact: dicer-like protein [Oryza sativa Indica Group] 1.0e-17
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene47351 SustainPine v3.0 346
AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 24 1.008e-07
Putative C-terminus
sp_v3.0_unigene47566 SustainPine v3.0 288
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SBK1_RICCO 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.44e-18
Putative N-terminus
sp_v3.0_unigene47812 SustainPine v3.0 1393
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 45 3.944e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain