Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Histone H2B

Term: IPR000558  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene601 SustainPine v3.0 877
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene1206 SustainPine v3.0 790
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 9.99967e-42
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene2674 SustainPine v3.0 1064
• AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 5.00264e-43
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.098e-33
Putative Complete
sp_v3.0_unigene3130 SustainPine v3.0 1552
• AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Extensin-like protein 5.36e-31
N-terminus
sp_v3.0_unigene4452 SustainPine v3.0 805
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 0.0
Complete
sp_v3.0_unigene4872 SustainPine v3.0 752
• AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 5.99756e-43
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.331e-35
C-terminus
sp_v3.0_unigene5242 SustainPine v3.0 290
• AutoFact: TT_ORF1 multi-domain protein 9.0e-08
putative_coding
sp_v3.0_unigene6403 SustainPine v3.0 1468
• AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 4.04e-31
Putative N-terminus
sp_v3.0_unigene8719 SustainPine v3.0 997
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10451 SustainPine v3.0 825
• AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Extensin-like protein 6.093e-31
Internal
sp_v3.0_unigene10939 SustainPine v3.0 765
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 7.465e-36
C-terminus
sp_v3.0_unigene10989 SustainPine v3.0 912
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative histone H4 0.0
Complete
sp_v3.0_unigene11677 SustainPine v3.0 1829
• AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin-like protein 5.595e-31
Internal
sp_v3.0_unigene13751 SustainPine v3.0 2286
• AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene14199 SustainPine v3.0 1039
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene15624 SustainPine v3.0 1059
• AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 4.99997e-41
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 0.0
Complete
sp_v3.0_unigene16525 SustainPine v3.0 902
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17107 SustainPine v3.0 1028
• AutoFact: Histone H2B.3 n=41 Tax=Spermatophyta RepID=H2B3_ARATH 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2B 1.22e-33
Complete
sp_v3.0_unigene17148 SustainPine v3.0 1347
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17451 SustainPine v3.0 565
• AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain