Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Proteasome component (PCI) domain

Term: IPR000717  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene65894 SustainPine v3.0 171
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene65934 SustainPine v3.0 139
AutoFact: probable 26S proteasome regulatory subunit [Larix decidua] gb|ABA81910.1| probable 26S proteasome regulatory subunit [Larix kaempferi] gb|ABA81911.1| probable 26S proteasome regulatory subunit [Larix sibirica] gb|ABA81912.1| probable 26S proteasome regula 9.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome subunit RPN7 1.463e-09
Putative C-terminus
sp_v3.0_unigene69222 SustainPine v3.0 176
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73506 SustainPine v3.0 339
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RFF6_RICCO 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF3a 1.157e-13
Internal
sp_v3.0_unigene74057 SustainPine v3.0 430
AutoFact: Eukaryotic initiation factor 3E subunit n=4 Tax=rosids RepID=Q9C5Z3_ARATH 2.0e-38
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative eukaryotic translation initiation factor 3E 2.343e-15
Internal
sp_v3.0_unigene78688 SustainPine v3.0 190
AutoFact: translation initiation factor eIF-3 subunit 6 [Arabidopsis thaliana] gb|AAG53613.1|AF285832_1 eukaryotic initiation factor 3E subunit [Arabidopsis thaliana] gb|AAK64017.1| putative translation initiation factor 3 [Arabidopsis thaliana] gb|AAL85088.1| puta 1.0e-16
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit E; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene78904 SustainPine v3.0 298
AutoFact: putative COP9 signalosome complex subunit 2 [Oryza sativa Japonica Group] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 6.859e-13
Internal
sp_v3.0_unigene84140 SustainPine v3.0 404
AutoFact: Nop53 multi-domain protein 1.0e-05
coding
sp_v3.0_unigene93596 SustainPine v3.0 1794
AutoFact: COP9 signalosome complex subunit 1 [Arabidopsis thaliana] sp|P45432.2|CSN1_ARATH RecName: Full=COP9 signalosome complex subunit 1; Short=CSN complex subunit 1; AltName: Full=Constitutive photomorphogenesis protein 11; AltName: Full=Protein FUSCA 6 gb|AAK2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene101051 SustainPine v3.0 445
AutoFact: 19S proteosome subunit 9 [Arabidopsis thaliana] 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene113915 SustainPine v3.0 456
AutoFact: COP9 signalosome complex subunit 2 [Arabidopsis thaliana] sp|Q8W207.1|CSN2_ARATH RecName: Full=COP9 signalosome complex subunit 2; Short=Signalosome subunit 2; AltName: Full=Protein FUSCA 12 gb|AAL58101.1|AF395058_1 CSN complex subunit 2 [Arabidopsis thal 6.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 2.893e-13
N-terminus
sp_v3.0_unigene127173 SustainPine v3.0 530
AutoFact: Probable 26S proteasome regulatory subunit (Fragment) n=11 Tax=Spermatophyta RepID=Q30HZ5_9CONI 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Probable 26S proteasome regulatory subunit 0.0
C-terminus
sp_v3.0_unigene127858 SustainPine v3.0 1432
AutoFact: 26S proteasome regulatory particle non-ATPase subunit3 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic 2.707e-18
C-terminus
sp_v3.0_unigene129043 SustainPine v3.0 332
AutoFact: eukaryotic translation initiation factor 3 subunit A [Zea mays] sp|Q9XHR2.1|EIF3A_MAIZE RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: Full= 2.0e-16
FL-Next: sp=Eukaryotic translation initiation factor 3 subunit A; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene131112 SustainPine v3.0 319
AutoFact: COP9 signalosome complex subunit 2 n=3 Tax=Brassicaceae RepID=CSN2_ARATH 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 2 2.893e-13
N-terminus
sp_v3.0_unigene131210 SustainPine v3.0 307
AutoFact: 26S proteasome subunit RPN7 [Capsicum annuum] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome subunit RPN7 1.147e-09
Internal
sp_v3.0_unigene131505 SustainPine v3.0 564
AutoFact: Proteasome component (PCI) domain protein [Arabidopsis thaliana] emb|CAC01760.1| putative protein [Arabidopsis thaliana] gb|AAM20695.1| putative protein [Arabidopsis thaliana] gb|AAN15659.1| putative protein [Arabidopsis thaliana] gb|AED92183.1| Proteasom 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At5g15610 1.817e-09
N-terminus
sp_v3.0_unigene132024 SustainPine v3.0 234
AutoFact: Probable 26S proteasome regulatory subunit (Fragment) n=11 Tax=Spermatophyta RepID=Q30HZ5_9CONI 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 26S proteasome subunit RPN7 2.953e-09
Internal
sp_v3.0_unigene133453 SustainPine v3.0 491
AutoFact: PCI domain containing protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: COP9 signalosome complex subunit 4 3.541e-09
C-terminus
sp_v3.0_unigene135437 SustainPine v3.0 222
AutoFact: 26S proteasome regulatory subunit N5 n=1 Tax=Arabidopsis thaliana RepID=B3H6B0_ARATH 1.0e-11
FL-Next: tr=26S proteasome p55 protein-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 26S proteasome subunit RPN5b 1.354e-09
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain